Pseudomonas wayambapalatensis: HU734_006345
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Entry
HU734_006345 CDS
T08016
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy00300
Lysine biosynthesis
pwy01100
Metabolic pathways
pwy01120
Microbial metabolism in diverse environments
pwy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU734_006345 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pwy01002
]
HU734_006345 (dapE)
Enzymes [BR:
pwy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HU734_006345 (dapE)
Peptidases and inhibitors [BR:
pwy01002
]
Metallo peptidases
Family M20
HU734_006345 (dapE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QXI44393
LinkDB
All DBs
Position
complement(1454549..1455700)
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AA seq
383 aa
AA seq
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MTAPAELSPTLQLACDLIRRPSVTPVDADCQTLMMNRLGAVGFQLEPMRFEDVDNFWATH
GNQDGPVLCFAGHTDVVPTGPVQQWQHEPFDALIDADGMLCGRGAADMKGSLASMVIASE
RFVNDHPDHRGKIAFLITSDEEGPAHHGTKAVVELLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTVRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGDLVALFNFRFSTESTVEGLQQRVAAILDKHQLDWSIDWALSGLP
FLTEPGELLDAVSSSIKAVTGRDTQPSTSGGTSDGRFIATLGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccagccgagctctcgcctacccttcaactggcctgcgacctgatccgtcgc
ccctcggtgacgccggtcgatgccgactgccagaccctgatgatgaaccgcctgggtgcc
gtcggcttccagctcgagccgatgcgcttcgaggacgtcgacaacttctgggccacccat
ggcaaccaggacggtccggtgctgtgcttcgcgggtcataccgacgtggtgcccaccggc
cccgtgcagcaatggcagcatgagcctttcgacgcgctgatcgacgccgacggcatgctc
tgcggccgcggcgctgccgacatgaagggcagcctggcctcgatggtcatcgccagcgag
cgcttcgtgaacgatcaccccgaccaccgcggcaagattgccttcctcatcaccagcgac
gaggaaggtccggcgcatcacggcaccaaggctgtggtggagttgctcaaggcccgcaac
gagcgcctggactggtgcatcgtcggcgagccgtcgagcaccacgctgctcggggacgtg
gtcaagaacggccgtcgcggctcgctcggcgccaagctgaccgtgcgcggcaagcagggc
cacgtggcctacccgcacctggcccgcaacccgatccacctggccgcgccggccctggcg
gaactggctgccgagcactgggacgagggcaatgccttcttcccgccgaccagcttccag
atctccaacctcaactccggcaccggcgccaccaacgtggtcccgggcgacctggtcgcg
ctgttcaacttccgtttctccaccgagtcgactgtcgaaggcctgcaacagcgggtggcg
gcaatcctcgacaagcaccagctggactggtcgatcgactgggcgctgtcgggcctgccg
ttcctcaccgaaccaggtgaactgctcgatgcggtgtcatcgagcatcaaggccgtcacc
ggtcgcgacacccagccgtccaccagcggcggcacctccgatggccgtttcattgccacc
ctgggcacccaggtggtcgaactgggcccggtcaacgccaccatccaccaggtggacgag
cgtatcctggccagcgacctggacctgctgaccgaaatctattaccagaccctggtgcgg
ttgctcgcctga
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