Pseudomonas xanthosomatis: KSS93_08085
Help
Entry
KSS93_08085 CDS
T07606
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa00300
Lysine biosynthesis
pxa00550
Peptidoglycan biosynthesis
pxa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KSS93_08085
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KSS93_08085
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pxa01011
]
KSS93_08085
Enzymes [BR:
pxa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KSS93_08085
Peptidoglycan biosynthesis and degradation proteins [BR:
pxa01011
]
Precursor biosynthesis
Amino acid ligase
KSS93_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
QXH47850
LinkDB
All DBs
Position
1807507..1808994
Genome browser
AA seq
495 aa
AA seq
DB search
MTMPLSKLFAHASRDPLIREITLDSRQVRQGDLFLAVPGAKVDGREHIADALSRGAAAVA
YEEQGATVLPLTDVPLIPVKGLIGQLSQIAGRFYGEPSRQLNLVGVTGTNGKTSVTQLVA
QALDALGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLNDLKKGGAKAVAMEVSSHA
LEQGRVAALEFDIAVMTNLSRDHLDYHGSMQAYEAAKAKLFAWPSLRCQVVNLDDAFGCR
LADAFAHRPVADHIETRLLSYSLENPDASLYCREAHFDDDGVRATLVTAQGERTLRSQLL
GRFNLSNMLAAVATLQALDYSLEEILKVTPQLQGPVGRMQRLGGGDKPLVVVDYAHTPDA
LDKVLEALRPHAHGQLLCLFGCGGDRDAGKRPLMAEVAERLADRVLVTDDNPRTEDPQRI
FDDIRPGFTKPAAVEFVAGRGEAIARLIASANANDVIVLAGKGHEDYQEINGQRHDFSDL
IEADKALAAWEATHA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattgagcaagctgttcgcccatgccagccgcgacccgctgattcgcgaa
atcaccctggacagccgtcaggtgcgccagggtgacctgttcctcgctgtgcccggcgcc
aaggtcgacggccgcgagcacatcgccgatgcgctgtcccgtggcgccgctgccgtggct
tatgaagagcagggcgccaccgtgctgccgctgaccgatgtgccgctgattccggtgaaa
ggcctgattggccagttgtcgcagattgccgggcgcttctatggcgagcccagccgccag
ctcaatctggtgggggttaccggcaccaacggcaagaccagcgtcacccaactggtggcc
caggcgctcgatgcgctgggccagcgttgcggcctgatcggcaccctgggcaccggcttt
tacggtgagctgcagagcggccgcctgaccacccccgacccgatcgccgtgcagtctacc
ctgaacgaccttaaaaagggcggtgccaaggccgtggccatggaggtgtcctcccacgcc
ctcgagcagggccgggtggccgcactggaattcgacatcgcggtgatgaccaacctgtcc
cgcgatcacctcgactaccacggcagcatgcaggcctatgaggccgccaaggccaagctg
ttcgcctggccgagcctgcgctgccaggtggtgaacctggacgacgcgttcggctgccgc
ctggccgacgctttcgcccaccgccctgttgccgatcatatcgagacccggctgctcagc
tacagcctggaaaacccggacgcgtcgctgtattgccgcgaagcccacttcgatgacgat
ggcgtgcgcgccaccctcgtcaccgcccagggcgaacgcaccctgcgcagccaactgctc
gggcgcttcaacctgagcaacatgctggctgccgtggccacgctgcaggcgcttgactac
tcgctggaagaaattctcaaggtcaccccgcagttgcaggggccggtcggccgcatgcag
cgcctgggtggcggtgacaaaccgctggtggtggtcgactacgcgcacacccctgatgct
ctggacaaggtgctggaggccctgcgcccccacgcccacggccagctgctgtgcctgttc
ggctgcggcggcgaccgtgatgccggcaagcgcccgctgatggccgaagtggccgagcgc
ctggccgaccgcgtgctggtcaccgacgacaacccgcgcactgaagacccgcagcgcatc
ttcgacgacattcgcccaggtttcaccaaacctgccgccgtagagttcgtcgccggccgt
ggcgaagccatcgcccgcctgatcgccagtgccaacgccaacgatgtgatcgtgctggcc
ggcaaggggcacgaggactaccaggagatcaacggccagcgccatgatttttccgacctg
atcgaagccgacaaggcacttgcagcctgggaggctacgcatgcttaa
DBGET
integrated database retrieval system
