Pyrus x bretschneideri (Chinese white pear): 103935461
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Entry
103935461 CDS
T03446
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxb03009
]
103935461
03036 Chromosome and associated proteins [BR:
pxb03036
]
103935461
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103935461
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
Pre-60S particles
Helicases
103935461
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103935461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Zip
Motif
Other DBs
NCBI-GeneID:
103935461
NCBI-ProteinID:
XP_009343503
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MPSIEVSDYLLAGTTPKEKKMKKLKSETLGAVADSPTTEKKSKKESKHKKRKASDDEDRS
ETSSEMGEPVNVKPPKSEEKSKKKSKKAKVEPEEDDEEKTEEMVKEDPNAVSKFRISAPL
RAKLKENGIESLFPIQAMTFDTILDGLDLVGRARTGQGKTLAFVLPVLESLTNGPAREFR
KTGYGRPPTVIVLLPTRELAKQVFADFEAYGGAVGLAACCVYGGSPYGAQESKLRRGVDV
VIGTPGRIKDHIERGNIDLSTLKVRILDEADEMLRMGFVDDVELILGKVKDVSKVQTLLF
SATLPSWVKGISSRFLKPDKKTVDLVGNEKMKASTNVRHIVLPCSSSARSELIPDIIRCY
SSGGRTIIFTETKEAASGLAEALPGARALHGDIQQGQREVTLAGFRSGKFMTLVATNVAA
RGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNSGVAVMLYDPRRSNFSKIERESGVK
FEHISAPQPLDIAKAVGQDAAEMITKISDSVIPAFKSVAEELLNTSGLSAVDLLAKALAK
AAGYTEIKKRSLLSSMENHVTVLLEAGKPIYSPSFAFGVLRRFLPEEKVESVKGMALTAD
GNGAVFDVAAEDLDLFLAGQENAANVSIEVLKSLPDLQEKESRNSRFGGGGRFGRGGGGG
GFRNDRYSNNRSSGGGRGRGNRW
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgccttctatagaagtatccgattatctacttgcgggaaccactccgaaggagaagaag
atgaagaaattgaaaagcgaaaccctaggcgccgtggccgactcgccaactactgagaag
aagtcgaagaaggagtctaagcacaaaaagcggaaggcttcggatgacgaggacaggagc
gagacgagctccgagatgggcgagcccgtgaatgtgaagcctccgaagagcgaggagaag
agcaagaagaagtcaaagaaggcgaaggtggagccggaggaggacgacgaggagaagacc
gaggagatggttaaagaggatcctaacgcggtgtccaagtttcggatttcggcgcccttg
agggccaaattgaaggagaatgggatcgaatccttgttccctattcaggccatgacattc
gataccattttggatggtttggatttggtcggccgggctcgaacagggcagggtaaaact
ctggctttcgtgttgcccgttttggagtctttgacaaatgggcctgcaagagaatttaga
aagactggttatggtagacctccaactgttatcgtgcttttacccaccagggaacttgct
aaacaggttttcgccgattttgaagcttatggtggtgctgtggggctagcagcgtgttgt
gtatatggtggatctccctacggggctcaagaaagtaagctaaggagaggggtggatgtt
gttattggaacgcctggccgcataaaggatcatatagagaggggcaatatcgacttgagt
acattgaaggttaggatcctcgatgaagctgatgaaatgctgaggatgggctttgttgat
gatgttgaactcattctaggcaaagtgaaggatgtaagtaaagttcaaacgcttctcttc
agtgcaaccttgccgagttgggtgaaaggcatttcttctaggtttctcaaaccagataag
aaaactgtagatcttgttggtaatgaaaaaatgaaggccagcaccaatgttaggcatatt
gttcttccttgctccagttcagcaagatcagaacttattcctgatatcatacgttgttac
agcagtggaggccgcacaattattttcaccgagacaaaggaagctgcttctggacttgct
gaggcgctgcctggagcccgagctttgcatggggacatacagcagggccaacgtgaggtc
acacttgctggtttcaggtctggcaagtttatgacattagtagccactaatgtggcagcg
cgtggactggatatcaatgatgttcaattaattattcagtgtgaacccccacgtgatgta
gaagactatattcatcgatctggacgcacagggagagcaggcaattctggagttgcagtc
atgctttatgatcccagaaggtcaaatttttcaaaaatcgagagagagtcgggggtgaaa
tttgaacacatttctgctcctcagccacttgatattgccaaagcagttggtcaagatgca
gcagaaatgataaccaaaatctctgacagtgtaattcctgctttcaagtctgttgccgag
gagctacttaacacctctggcctatctgcagtagatctactggcaaaagcacttgctaaa
gctgctggctacaccgagataaagaagagatcacttcttagctccatggaaaaccatgtc
acagtacttctcgaggctggaaagcccatttattcaccgtcttttgcttttggggtcttg
aggagattcttaccagaggagaaggttgagtcagtgaagggtatggcgctaacagctgat
ggaaatggtgcagtgtttgatgtagcagctgaagatttggatttgtttcttgctggtcag
gaaaatgcagctaatgtgagcatagaggtgttgaaatcactgcctgatttacaagaaaaa
gaatcaaggaattcaagatttggcggtggtggaaggtttggccgtggtggtggaggtgga
ggttttcgaaatgataggtattccaacaaccgatccagtggtggtgggaggggtcgcggc
aacagatggtga
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