Pyrus x bretschneideri (Chinese white pear): 103938636
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Entry
103938636 CDS
T03446
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxb03009
]
103938636
03036 Chromosome and associated proteins [BR:
pxb03036
]
103938636
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103938636
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
Pre-60S particles
Helicases
103938636
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103938636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
YgbB
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
103938636
NCBI-ProteinID:
XP_018500823
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MPSMDVSDYLLAGTTPKDKKEKKKKLKSEALDDAADSPTTEKKSKKESKHKKRKASDDED
RSETSSEMGEPVNVKPPKSEEKSKKKSKKAKVEEPEEEEEMPKEDPNAVLKFRISAPLRA
KLKENGIESLFPIQAMTFDTILDGLDLVGRARTGQGKTLAFVLPVLESLTNGPAKACRKT
GYGRPPTVIVLLPTRELAKQVFADFEAYGGAVGLAACCVYGGSPYGAQESKLRRGVDVVI
GTPGRIKDHIERGNIDLSTLKVRILDEADEMLRMGFVDDVELILGKVKDVSKVQTLLFSA
TLPSWVKGISSRFLKPDKKTVDLVGNEKMKASTNVRHIVLPCSSSARSQLIPDIIRCYSS
GGRTIIFTETKEAASGLAEALPGARALHGDIQQGQREVTLAGFRSGKFLTLVATNVAARG
LDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNSGVAVMLYDPRRSNFSKIERESGVKFE
HISAPQPLDIAKAVGQDAAEMITKISDSVIPAFKSVAEELLNTSGLSAVDLLAKALAKAA
GYTEIKKRSLLSSMENHVTVLLEAGKPIYSPSFAFGVLRRFLPEEKVESVKGMALTADGN
GAVFDVAAEDLDLFLAGQENAANVSITVLKSLPDLQEKESRNTRFGSGGRFGRGGGGGFR
NDRYSNNRSGGGGGGGRGRGNRW
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatggacgtatccgattatcttctcgcgggaaccactccgaaggataagaag
gagaagaagaagaaattgaaaagcgaagccctagacgacgccgccgactcgccgactact
gagaagaagtcgaagaaggagtctaagcataaaaagcggaaggcttcggatgacgaggac
aggagcgagacgagctccgagatgggcgagcccgtgaatgtgaagccgccaaagagcgaa
gagaagagcaagaagaagtcgaagaaggcgaaggtggaggagccggaggaggaggaggag
atgcccaaagaggatcctaatgcggtgttgaagtttcggatttcagcgccgttgagggcc
aaattgaaggagaatgggatcgaatccttgtttcctattcaggccatgacattcgatacc
attttggatggtttggatttggtcggtcgggctcgaactggacagggtaaaactctagct
tttgtgttgcctgttttggagtccttaacaaatgggcctgcaaaagcatgtagaaagact
ggttatggtaggcctccaactgttatcgtgcttttacccactcgggaacttgccaaacag
gttttcgccgattttgaagcttacggtggtgctgtggggctagcagcatgttgtgtgtat
ggtggatctccttacggggctcaagaaagtaagttaaggagaggggtggatgttgttatt
ggaacgcctggccgtataaaggatcatatagagaggggcaatatcgacttgagtaccttg
aaagttaggatccttgacgaagctgatgaaatgctgaggatgggctttgttgatgatgtt
gaactcattctaggcaaggtgaaggatgtaagtaaagttcaaacgctactttttagtgca
accttgccgagttgggtgaaaggcatttcttctaggtttctcaaaccagataagaaaact
gtagatcttgttggtaatgaaaaaatgaaggccagcaccaatgttaggcatattgttctt
ccttgctccagttcagcaagatcgcaacttattcctgatatcatacgttgttatagcagt
ggaggacgcacaatcattttcactgagacaaaggaagctgcttctggacttgctgaggcg
ttgcctggagcccgagctttgcacggggacatacagcagggccaacgtgaggtcacactt
gctggtttcaggtctggcaagtttttgacattagtcgccacaaatgtggcagcgcgtgga
ctggatatcaatgatgttcaattaattatccagtgtgaacccccacgtgatgtagaagac
tatatccatagatctggacgcacaggaagagcaggaaattctggagttgctgtcatgctt
tatgatccaagaaggtcaaatttttcaaaaatcgagagggagtcgggggtgaaatttgaa
cacatttctgctcctcagccacttgatatagctaaagcagtaggtcaagatgcagcagaa
atgataaccaaaatttctgatagtgtaattcctgctttcaagtctgttgccgaggagcta
cttaacacctctggcctatctgcagtagatctactggcaaaagcacttgctaaagctgct
ggctacaccgagataaagaagagatcacttcttagctctatggagaaccatgtcacagta
cttctcgaggctggaaagcccatttattcaccgtcttttgcttttggggtcttgaggaga
ttcttgccagaggagaaggttgagtcagtgaagggtatggcactaacagctgatggaaat
ggtgcagtttttgatgtggcagctgaagatttggatttgtttcttgctggtcaggaaaat
gcagctaatgtgagcataacggtgttgaaatcattgcctgatttacaagaaaaagaatca
aggaatacaagatttggcagtggtggaaggtttggccgtggtggtggaggtggttttcga
aatgataggtattccaacaaccgatccggtggtggtggtggtggtgggagaggtcgcggc
aacagatggtga
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integrated database retrieval system
