Pyrus x bretschneideri (Chinese white pear): 103953571
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Entry
103953571 CDS
T03446
Name
(RefSeq) HBS1-like protein isoform X2
KO
K14416
elongation factor 1 alpha-like protein
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103953571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103953571
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103953571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
zf-RanBP
GTP_EFTU_D4
MMR_HSR1
Mg_chelatase
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
103953571
NCBI-ProteinID:
XP_009363605
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MPHKVNYGIDYDDDYDAYEDYDYDYDDDESGIEKNVTGKAVESKRETERPKVWSCSICTY
DNEENMSACDICGVLRNPLSKSNRDNKTVEGRCKDSGVSIMAKSIFASLPHQKPKQAVLF
HQQKDDSMIEEGNNFHRLGDFKGPIHEFHNTFNVHNKHRIDIAPFKFDVPSPDDVVSNGL
WSSKTAGVIDLKSSKASSNVAKKSSVVSIQSSAEWSGSSSTMAQKREQGRLDKQNQLENR
TVSYHHGSSGAITIQENGKFSESSSASQPTSRRDSGVESTSEIRGKSQSVTSGLKNMTLD
ARSGYSNSVSVAESRSQADYKPEKWMLPDQAVDTLTQLNLAIVGHVDSGKSTLSGRLLHL
LGRISQKEMHKYEKEANLQGKGSFAYAWALDESTEERERRITMTVAVAYFDSRKYHVVVL
DSPGHKDFVPNMISGATQADAAILLIDASVGAFEAGMDVGKGQTREHAQLIRSFGVDQII
VAINKMDIVEYSKDRFDLIRQTLGTFLRSCGFRDSWVSWIPLSAMENQNLVAAPSDVRLL
SWYRGPYLLDAIDSLKPPTREFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSGFKVL
VMPSGESGTVRSLERDSQACAIARAGDNVAVTLQGIDGGRVMAGGVLCHPSFPVAVAKHL
ELKVLVLDVTTPILIGSQLEFHIHHAKEAARVVKISSLLDPKTGKVTRKAPRCLTAKQSA
VIEVILHAPVCVEEFSNSRALGRAFLRALGSTIAVGVVTRIIEEQK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataaagtaaactacggaattgattatgatgatgactacgatgcatatgaagat
tatgattatgattatgatgatgatgagtctggaatagaaaagaatgtaacaggcaaagca
gttgagtcaaagcgggaaactgaaaggcctaaggtctggagttgttccatttgcacgtat
gataatgaagagaatatgtctgcatgtgacatttgtggggttcttcgcaaccctttgtct
aaaagcaatagagataataaaacagttgaaggcagatgcaaagattctggagtatctata
atggccaagtctatttttgcatcattgccgcaccagaagccaaaacaggctgtactattt
catcagcagaaagatgattctatgatagaagagggcaataacttccacaggcttggggat
ttcaaaggacctattcatgaattccataacacttttaatgttcataacaaacaccgtatt
gatatagctcctttcaagtttgatgttccatccccagatgacgtggtttctaatggattg
tggtcctccaaaacagctggtgttattgacttgaaatcttcaaaagcgtcctcaaatgtt
gcgaagaagagtagtgtagttagcatacaatcaagtgctgaatggtcaggtagctcatct
acaatggcacaaaaaagggaacaaggtagattagataagcaaaatcagttggagaatcgg
acagttagttatcaccatggaagtagtggtgcgattactatacaagaaaatggtaaattt
tcagagagttcatctgcttcgcagccaacaagcagacgtgacagtggggttgagagcact
tctgaaattaggggcaagtcacagagtgttaccagtggcttgaaaaacatgactttggat
gctcgatctggatattctaatagtgttagtgttgcagaatctcgttcacaagcggactac
aaacccgagaagtggatgcttcctgaccaagctgtagatacactgactcaactgaatctt
gcaatagttggtcatgttgattctggaaaatcaacactctcaggtaggttgcttcacctt
ttgggaaggatatctcagaaagaaatgcacaaatatgagaaagaggcaaacttgcaggga
aaggggtccttcgcatatgcttgggcattggatgagagtaccgaagagagggaaagaaga
ataactatgacagtggctgttgcatactttgattccagaaaatatcatgttgttgtgctt
gactcccctggccataaagattttgttcctaacatgatatctggggcaacacaagctgat
gctgcgatacttctcatagatgcgtctgttggtgcattcgaagctggtatggatgttggc
aagggacagacaagggagcatgcacaacttattagaagttttggtgttgatcaaattata
gttgctattaacaagatggatattgttgagtattccaaggatcgatttgatttgatcaga
cagacacttggaacatttctccgttcctgtggtttcagagattcttgggtgtcttggatt
ccattgagtgccatggaaaatcagaatttggtagcagctccttctgatgtccgtttattg
tcttggtaccgtggaccttacctgttggatgcaattgattccctcaaacctcctacaaga
gagttttcaaagccattgctgatgcctatatgtgatgtcatcaaatcttcttcacaagga
caggtgtctgcttgtggtaaattggaagcaggagctcttcgaagtggattcaaggttctg
gttatgccttcgggagaatcagggactgtacgctcgttagaacgtgactctcaggcttgt
gcaattgcaagggctggagacaatgtggctgttactttgcaaggcattgatggaggtcgt
gtgatggcaggaggtgtgctctgtcacccaagttttccagttgcagttgcaaaacatttg
gaattgaaggtgcttgttttggatgttacaaccccgattttaattggctctcagttggaa
ttccacatacaccatgcgaaggaggctgcgagagtggtaaagatttcatcattgcttgat
ccaaagactggaaaagtgacaagaaaggctcctcgctgtcttactgcaaagcagagcgcg
gtcatagaggtaattcttcatgcaccggtttgtgttgaagagttctccaactccagagcc
cttgggagggcctttttgagggcgttaggaagcactattgctgtcggtgttgtaacccgg
attatagaggagcagaagtag
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