Pyrus x bretschneideri (Chinese white pear): 103957579
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Entry
103957579 CDS
T03446
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103957579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103957579
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103957579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
zf-RanBP
GTP_EFTU_D4
GramPos_pilinD3
Mg_chelatase
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
103957579
NCBI-ProteinID:
XP_009368033
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
TGKAVESKRETERPKVWSCSICTYDNEENMSACDICGVLRNPLSKSNRDNKTVEGRCKDS
GVSIMAKSIFASLPHQKPKQAVLFHQQKDDSMIEEGNNFHRLGDFKGPIHEFHNTFNVHN
KHRIDIAPFKFDVPSPDDVVSNGLWSSKTGSKPGVIDLKSSKASSNVAKKSNVVSIQSSA
EWSGSSSTMAQKREQGRLDKQNQLENRTVSYHHGSSGAITIQENGKFSESSSASQPTSRR
DSGVESTSEIRGKSQSVTSGLKNMTLDARSGYSNSVSVGESRSQADYKPEKWMLPDQAVD
TLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEANLQGKGSFAYAWALDES
TEERERGITMTVAVAYFDSRKYHVVVLDSPGHKDFVPNMISGATQADAAILLIDASVGAF
EAGMDVGKGQTREHAQLIRSFGVDQIIVAINKMDIVEYSKDRFDLIRQTLGTFLHSCGFR
DSWVSWIPLSAMENQNLVAAPSDVRLLSWYRGPYLLDAIDSLKPPTREFSKPLLMPICDV
IKSSSQGQVSACGKLEAGALRSGFKVLVMPSGESGTVRSLERDSQACAIARAGDNVAVTL
QGIDGGRVMAGGVLCHPSFPVAVAKHLELKVLVLDVTTPILIGSQLEFHIHHAKEAARVV
KISSLLDPKTGKVTRKAPRCLAAKQSAVIEVILHAPVCVEEFSNSRALGRAFLRALGSTI
AVGVVTRIIEEQK
NT seq
2204 nt
NT seq
+upstream
nt +downstream
nt
taacaggcaaagcagttgagtcaaagcgggaaactgaaaggcctaaggtctggagttgtt
ccatttgcacgtatgataatgaagagaatatgtctgcatgtgacatttgtggggttcttc
gcaaccctttgtctaaaagcaatagagataataaaacagttgaaggcagatgcaaagatt
ctggagtatctataatggccaagtctatttttgcatcattgccgcaccagaagccaaaac
aggctgtactatttcatcagcagaaagatgattctatgatagaagagggcaataacttcc
acaggcttggggatttcaaaggacctattcatgaattccataacacttttaatgttcata
acaaacaccgtattgatatagctcctttcaagtttgatgttccatccccagatgacgtgg
tttctaatggattgtggtcctccaaaacaggttcaaaacctggtgttattgacttgaaat
cttcaaaagcttcctcaaatgttgcgaagaagagtaatgtagttagcatacaatcaagtg
ctgaatggtcaggtagctcatctacaatggcacaaaaaagggaacaaggtagattagata
agcaaaatcagttggagaatcggacagttagttatcaccatggaagtagtggtgcgatta
ctatacaagaaaatggtaaattttcagagagttcatctgcttcgcagccaacaagcagac
gtgacagtggggttgagagcacttctgaaattaggggcaagtcacagagtgttaccagtg
gcttgaaaaacatgactttggatgctcgatctggatattctaatagtgttagtgttggag
aatctcgttcacaagcggactataaacccgagaagtggatgcttcctgaccaagctgtag
atacactgactcaactgaatcttgcaatagttggtcatgttgattctggaaaatcaacac
tctcaggtaggttgcttcaccttttgggaaggatatctcagaaagaaatgcacaaatatg
agaaagaggcaaacttgcagggaaaggggtccttcgcatatgcttgggcattggatgaga
gtactgaagagagggaaagaggaataactatgacagtggctgttgcatactttgattcca
gaaaatatcatgttgttgtgcttgactcacctggccataaagattttgttcctaacatga
tatctggggcaacacaagctgatgctgcgatacttctcatagatgcatctgttggtgcat
tcgaagctggtatggatgttggcaagggacagacaagggagcatgcacaacttattagaa
gttttggtgttgatcaaattatagttgctattaacaagatggatattgttgagtattcca
aggatcgatttgatttgatcagacagacacttggaacatttctccattcctgtggtttca
gagattcttgggtgtcttggattccattgagtgccatggaaaatcagaatttggtagcag
ctccttctgatgtccgtttattgtcttggtaccgtggaccttacctgttggatgcaattg
attccctcaaacctcctacaagagagttttcaaagccattgctgatgcctatatgtgatg
tcatcaaatcttcttcacaaggacaggtgtctgcttgtggtaaattggaagcaggagctc
ttcgaagtggattcaaggttctggttatgccttcgggagaatcagggactgtacgctcgt
tagaacgtgactctcaggcttgtgcaattgcaagggctggagacaatgtggctgttactt
tgcaaggcattgatggaggtcgtgtgatggcaggaggtgtgctctgtcacccaagttttc
cagttgcagttgcaaaacatttggaattgaaggtgcttgttttggatgttacaaccccga
ttttaattggctctcagttggaattccacatacaccatgcgaaggaggctgcgagagtgg
taaagatttcatcattgcttgatccaaagactggaaaagtgacaagaaaggctcctcgct
gtcttgctgcaaagcagagcgcggtcatagaggtaattcttcatgcaccggtttgtgttg
aagagttctccaactccagagcccttgggagggcctttttgagggcgttaggaagcacta
ttgctgtcggtgttgtaacccggattatagaggagcagaagtag
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