Pyrus x bretschneideri (Chinese white pear): 103959781
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Entry
103959781 CDS
T03446
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103959781
Spliceosome [BR:
pxb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103959781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
Suf
TPR_7
NRDE-2
TPR_12
Motif
Other DBs
NCBI-GeneID:
103959781
NCBI-ProteinID:
XP_009370417
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MADSETVVAQTSDVMGYTSAGYADASSNIAPDTGVLHSEATPEFSTTPGGSSIGDGNAYS
ADLNSLMQESQSYTTYETKPAVGVTDASGNVASNENEVLESSQVASYDSSMNGVIASGVG
TVSSVDNGDASDNAKPLDPQQFGDASAMSVEEDRLWNIVRANSLDFNSWTALIEETERVA
EDNILKIRKVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDIWL
HYCIFAINTYGDPDTVRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYSRI
LENPNQQLDRYWNSFKELAGSRPLSELRTAEEAAAAAGAHSEGSDKVNGEEVQSDGAEQS
PKPVSAGLTEAEELEKYITIREEVYKKAKEFDSKIISFETAIRRPYFHVRPLNSVELENW
TSYLDYIEREGDLNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDIANNALARATQV
FVKRQPEIHLFAARFKEQSGDIPGAQAAYQLVHSELSPGLLEAIVKHANMEHRLGNVEAA
YSLYEQAIAIEKGKEHSQMLPMLYAQYSRFTYLVSSNAEKAREILDGALEHIQLSRAFLE
SMIVFETIQPLPKRIDHIDSLVVKFIEPSSESPNFASVTDREELSGIYLEFVNLFGDAQS
IKKAEDRHAKLFLPHRSSTSELKKRQAEDFLSSDKVKLAKAYSGVPSPVQSVMGAYPNTQ
NQWPSGYGVQPQAWPPATQATQGQQWPAGYTQQPYNAYSGYGAGYTNPQAPAVAPQTAAY
GAYPSTYPPQQAVPPQSYAHPAVAAVAPAAAVAPAPAPAAAVAPAPQPASAPQAYYGSYY
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtgagacagttgttgctcaaacatctgatgtgatggggtatacatcagca
ggatatgctgatgccagctcaaatattgctcctgatacgggtgtgttgcattctgaggct
accccagagttttctaccacgcctggtggttctagcataggcgatggaaatgcatattct
gcggatctcaattctctcatgcaagaatcacaaagttacacaacatatgagaccaaaccg
gctgttggagtgacagatgctagtgggaatgttgctagtaatgaaaatgaagtcttggag
tcatctcaagttgctagttatgattcttctatgaatggtgttattgcttctggagtggga
actgtttcatcagttgataatggagatgcttcagataatgctaaacctcttgatccgcaa
caatttggggatgcttctgccatgtctgtcgaagaagatagactgtggaatattgtgagg
gctaattccttggatttcaattcctggactgctttaattgaagagacagagagggttgca
gaggataacatattgaaaattcggaaagtttatgatgcatttttagcagagtttcctttg
tgttatggttattggaaaaagtatgcagatcatgaggcacgtctaggttctatcgataaa
gttgtggaggtctatgaacgagcagttcaaggtgttacctattcagttgatatctggttg
cattactgcatttttgctataaacacatatggagatccagacactgtcagaaggttgttt
gagcgaggacttgcttatgttggaacagattacctatcatttactctttgggataagtac
atagaatatgagtacatgcagcaggagtggggccgccttgccatgatctattcacgaata
ttagagaacccaaatcagcaattggatcggtattggaacagttttaaggagttagctgga
agtcggccactctcagaattgaggactgccgaagaagctgcagctgcagcaggtgcacat
tcagagggcagtgacaaagtaaatggggaagaggttcaatctgatggtgcagaacaatct
cctaaacctgtaagtgctggtttaacagaagcagaggagttggagaagtatatcaccatt
agagaagaggtgtataagaaagctaaagagttcgattctaagatcattagttttgaaaca
gctattaggaggccctactttcacgtgcggcctctcaattctgtagagcttgaaaattgg
accagctacctagactatatagaaagggaaggcgacttgaacaaggtagtcaagttatat
gaaaggtgcctaattgcttgtgctaattatcctgaatactggattcgatatgttctatgc
atggaggccagtggaagtatggacattgctaataatgctcttgctcgtgcaacccaggtc
tttgtgaagagacaaccggagattcacctttttgctgctcgattcaaagagcagagtggg
gatatacctggtgctcaagctgcctatcaacttgtacattctgaactctcacctggtctt
cttgaagcaatcgtgaagcatgcaaatatggaacaccgtctgggaaatgtggaagcggcc
tactctttgtacgaacaggccattgccattgaaaaaggaaaagagcattcacagatgtta
cccatgttgtacgctcagtactctcggttcacttacctggtttcttcgaatgcagaaaaa
gctagagaaattttagatggggcactcgagcatatacaattgtcaagagcatttcttgag
tccatgatagttttcgagacaatacagccactgccaaagcgaatcgatcacatagattcg
ttagttgtgaagttcatagagcccagctcagagagccccaattttgctagcgttactgac
agagaagagctatctggcatctatttggagtttgttaatctctttggagatgcacagtct
atcaagaaggctgaggatcgacatgctaagctcttcttacctcataggagcagcacatca
gagttgaaaaaacgtcaagcggaggactttttatcttccgataaagtgaagctagctaaa
gcttactctggtgttccatcccccgtccagtcggtcatgggagcatatccaaatacacag
aaccaatggccatctggttacggtgtgcagcctcaagcttggccaccagctacgcaagct
acacagggacaacagtggccagctggttatacccaacagccgtacaatgcatatagtggt
tatggagctggctacactaatccccaagcacccgcggtggcgccacaaactgctgcttat
ggtgcttatccttctacatatcctcctcagcaggccgtcccgcctcaaagttacgcacat
ccagccgtggcagcagtagcaccagcagcagcagtagcacccgctccagccccagcagca
gcagtagcaccggctccgcaacctgcttcagctcctcaggcgtattatgggagttactac
tga
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