Papilio xuthus (Asian swallowtail): 106115935
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Entry
106115935 CDS
T07456
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03440
Homologous recombination
pxu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106115935
03450 Non-homologous end-joining
106115935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxu03032
]
106115935
03400 DNA repair and recombination proteins [BR:
pxu03400
]
106115935
DNA replication proteins [BR:
pxu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106115935
DNA repair and recombination proteins [BR:
pxu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106115935
BRCA1-C complex
106115935
NHEJ (non-homologous end-joining)
MRX complex
106115935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_15
AAA_21
AAA_29
Snapin_Pallidin
Fzo_mitofusin
AAA_16
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106115935
NCBI-ProteinID:
XP_013165039
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MAGIKSLAVRGIRSFGPEDNDEQRISFERPLTLILGQNGCGKTTIIECVRYALTGQMPPG
SRNDCFVHDAKVNRSTEVLGQVKLKIVNAKDEQLEIARSMKVTALQKKKSKFQTLDSFLS
VIDEKGKTKDISSRCADLDSMMYEQLGVSKAIMNSVIFCHQEDSSWPLDEGKKVKERFDE
IFEADKYSDCFERLRKIRKEYETEIKVLEQKVANLTDKKENLDKKKLDVVNTESKISEAE
IRVAELEQEIKPLAEKIKAIETVQKNLVTIETKREKIKTKLEHFTTQEQELKTAITTLFE
GPLAELEKNISNYATTAKTKKEDLDNSYKQNNKFNIEEEKIANEKTSNEMKFKELILLES
QNQDKIDKKNTMIANTAKLAEIEIEKIESNEDAEKVGEAIKEKIKSLQTELSEKKREADT
EENKLQADVDTCRDALSRHKQKISNKESDIQNIKKEITKVEKGITDTNKSKVRLDFLEKK
MNTAEEDYQEVLNELNPEECQKSINEDEALMEKSEQELEELNEKINQLQKQSAKLKERDM
IEDSLKQKEKQMNVLKNKHRSVISDLLGTMPDKGYAMAINKLEYELRDEVDSVKKKLKEK
HTNLTSLETERKHVRELLTERRNELTAAEDQMFKACGTQTYEATLSKLNTTVEKLQEEQN
MLQSSMFIFTKYKNQLKDNSCCPLCNRGFDSDTEASDLISQLTTQVMNVPAKQEKVSEEL
QRTSAKRDDLLSMKSLNEKIKTLKEKDVPQLETRLKDVDTQIATLTEESEELSMTIMEPE
QKLQNARQIQSDMPLLDRYTNEVTTATKDLEAIKAECSHMVIDINLDEATTKKNGLRQQI
TSLRSQIKQSQTKLNQHTKKLQTMAEKKNKLKEELLNVQKKVQELVNLQENLKQLESNRE
KALVELKELQDGTAPLEVDLKEKEKIKSECVKKNRAAIDVKNDYIVKIKNAFDKVKSIEM
EIKQHNERNVQAEMDKIKEANERLMDKQKQIMVDRNTLTKKIDSLKDELAKQDIYKRNLE
DNLKLRKAQTEIANSESELAALNEKLSGVNMDMIAEKEPLMTKHEDFFKEKLQTEGLLRG
YKERLKQCKMELKKAVNEGIEKQYREKFYDLHVIKALEKDIKDYSVALEKCLMEFHKEKM
ENINLIIREMWRKIYRGNDIDYIEIKTEGSATADSDRRKYDYRVVQCKNGVEIDMRGRCS
AGQKVLACLIIRLALAETFSTRFGILALDEPTTNLDQENVKSLCEALGEIVLERMAQKNF
MFIIITHDREFIESLGSIDKVTHFYEVSRNEEGKSRIKKIRFT
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggctggtataaaatcgcttgctgtcaggggtataagaagttttgggccagaagataat
gatgaacaacgtatatcttttgaaaggccattaacattaattttgggacagaatggctgt
ggaaaaacaactattatagaatgtgtacgctatgctcttactggacagatgcccccaggt
agtcgtaacgattgttttgtccacgatgcaaaagttaaccgatcaacagaagtgttagga
caagtcaaattaaagattgtaaatgcaaaagatgaacaattggaaatagcaagatctatg
aaagttacagcgctacagaagaagaaaagtaaatttcagacattagattcatttctgtca
gtgattgatgagaaaggaaaaactaaggatatttcatcaagatgtgccgatttagactcc
atgatgtatgaacaattaggagtatcaaaagcaataatgaattcagtaatattttgtcat
caagaagattctagctggccacttgatgaggggaaaaaagtaaaggaacgttttgatgaa
atatttgaagcagacaaatacagtgactgttttgaacgattgagaaaaataaggaaagaa
tatgaaacagaaataaaagtattagaacagaaagtggcaaatttaacagataagaaagaa
aatttggataagaaaaaattagatgttgtaaatactgaatctaaaatctctgaagctgaa
atcagggtggctgaacttgaacaagaaattaaaccgcttgcagaaaaaattaaagccatt
gaaacagtgcagaaaaatttagtgacaattgaaaccaaaagagaaaaaattaaaacaaaa
ttagagcatttcacaactcaggaacaagaattgaaaactgccattaccaccttatttgaa
ggaccactagctgagctggagaaaaatatatccaattacgcgacaactgccaaaacaaag
aaggaagacttggataattcatacaagcaaaataacaaattcaatatagaggaggaaaag
attgccaatgaaaaaacgtcaaatgaaatgaagtttaaagaattaatactattggaaagt
cagaaccaagataaaattgataagaagaatactatgatagcaaacactgctaaactggct
gaaatagagatagagaaaattgaaagcaatgaagatgcagagaaagtgggagaggctata
aaggaaaaaataaaaagcctgcaaacggaactaagtgagaaaaagagagaagctgatacc
gaagagaacaaactacaagctgacgtagatacgtgtcgtgacgcattgtctcgtcacaaa
caaaaaataagtaacaaagaatctgatatacaaaatataaaaaaagaaatcaccaaagtg
gaaaaaggaatcaccgacacaaataagtctaaagtacgattagattttttggaaaagaaa
atgaatacagctgaagaggattatcaggaagttctgaacgagttgaatccggaggaatgt
caaaagtcgattaatgaagatgaagctttaatggaaaagagtgaacaggaacttgaagaa
ttaaatgaaaagatcaatcaattacaaaagcaaagcgccaaattaaaagagcgtgatatg
atagaagattcattaaaacaaaaagagaagcagatgaatgtattgaagaacaaacatcgc
agtgtcatcagtgatctgctcggtacaatgccggacaaaggttatgctatggccattaac
aaattggaatacgaattacgtgatgaagttgattctgttaaaaagaaattaaaagaaaaa
catacaaatcttacaagtttggaaacagaaaggaaacacgtgcgcgagctgttgacggaa
cgccgcaacgagctgacagcggccgaagaccagatgttcaaggcttgcggcactcagaca
tacgaggcgacgctcagcaaactaaatactactgttgaaaagttacaggaagaacaaaat
atgctccaatcatcaatgtttatatttacaaaatataaaaatcaactcaaagacaacagc
tgttgtcctctatgtaaccgaggattcgattctgatacagaggcatcagatttaatatct
caattgaccacacaagtgatgaatgtgccggctaaacaagaaaaagtatcagaagagtta
caaagaacatcagcaaagagggacgatctgctcagtatgaagtcgttgaatgaaaaaata
aagaccttgaaagagaaagatgtaccgcaacttgaaacccgtttgaaagacgtcgatacg
caaatagcaacattaacagaagaatccgaagaactatcaatgacaataatggagccggaa
cagaagctgcaaaacgctagacagatacagagtgacatgccgctactggatagatacact
aatgaagtaactacggcaactaaagatctagaagcaatcaaagccgagtgctcccacatg
gtaatagatatcaatttagatgaagctacaacaaagaagaatggattgagacaacagatc
acctctttaaggtctcaaattaagcaatcacaaacaaaactaaaccagcatactaaaaag
ttacaaaccatggccgaaaagaagaataaacttaaagaggaacttcttaatgtgcagaaa
aaggtccaagagttagttaatttacaagaaaatctgaaacaattagaatctaatagagaa
aaagcgttagttgaactaaaggaactgcaagatggaacagcgcctttggaagttgatttg
aaagaaaaggagaaaattaagagtgaatgtgttaagaaaaacagggctgcgatcgacgtc
aaaaatgattatatagttaaaataaaaaatgcatttgataaagtcaaatctattgaaatg
gaaatcaagcaacacaatgagagaaacgttcaagctgaaatggataaaataaaagaagcg
aatgaacggctgatggacaaacagaaacagataatggtcgacagaaatactcttactaag
aaaattgatagcttgaaagacgaacttgccaaacaagacatctacaagcgcaacttggaa
gataacctcaagctacgtaaagctcaaactgaaatagctaacagtgagagtgagttagca
gccctcaatgaaaagctgagtggagtcaacatggacatgattgctgagaaggaaccactt
atgacaaaacatgaggacttttttaaagaaaagttgcaaactgaaggtctgctgcgtgga
tacaaagaaagattgaaacaatgtaaaatggaactgaagaaagccgtgaacgagggtata
gagaaacagtacagggaaaaattttatgatttgcatgttattaaagctctggagaaagat
attaaagattattccgttgccttagaaaagtgccttatggagtttcataaagagaaaatg
gaaaatattaatttaattataagggaaatgtggagaaaaatatacagggggaatgatatt
gactatattgaaattaaaacagaaggcagtgcaactgctgactcggatcgcaggaaatat
gattacagagtggtgcaatgtaagaatggcgtggagatagacatgcgtggtcgttgcagc
gccggacagaaagtgttggcctgtctcatcatacgtttggcgttggctgagacatttagc
acaaggttcggtatcttagcattagatgagccaacgacaaatttggatcaagagaatgtt
aaaagtctctgcgaggctctcggtgaaatagttttggaaagaatggcgcaaaagaatttc
atgttcatcatcatcactcatgatagagaattcatcgagtccctgggcagtattgataag
gtcacgcatttttatgaagtttctagaaacgaagaaggaaagtctagaatcaaaaagata
agatttacttaa
DBGET
integrated database retrieval system
