KEGG   Pyrococcus kukulkanii: TQ32_08710
Entry
TQ32_08710        CDS       T04365                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pyc  Pyrococcus kukulkanii
Pathway
pyc03030  DNA replication
pyc03410  Base excision repair
pyc03420  Nucleotide excision repair
pyc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pyc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TQ32_08710
   03410 Base excision repair
    TQ32_08710
   03420 Nucleotide excision repair
    TQ32_08710
   03430 Mismatch repair
    TQ32_08710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyc03032]
    TQ32_08710
   03400 DNA repair and recombination proteins [BR:pyc03400]
    TQ32_08710
Enzymes [BR:pyc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TQ32_08710
    6.5.1.6  DNA ligase (ATP or NAD+)
     TQ32_08710
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     TQ32_08710
DNA replication proteins [BR:pyc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TQ32_08710
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TQ32_08710
DNA repair and recombination proteins [BR:pyc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TQ32_08710
   NER (nucleotide excision repair)
    Other NER factors
     TQ32_08710
   MMR (mismatch excision repair)
    Other MMR factors
     TQ32_08710
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Tcp10_C Methyltransf_8 TPR_1 DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: AMM54549
UniProt: A0A127BCM3
LinkDB
Position
complement(1591618..1593297)
AA seq 559 aa
MRYLELAQLYQKLEKTTMKLIKTRLVADFLKKVPDDHLEFIPYLILGDVFPEWDERELGV
GEKLLIKAVAMATGVDAKEIENSVKDTGDLGESIALAVKKRKQRSFFSQPLTIKRVYQTL
VKVAETTGEGSQEKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRDAIALAFH
VKVELVERAYMLTSDFGFVAKVAKLEGNEGLAKVTIQIGKPIKPMLAQQAANIKEALLEM
GGEAEFEIKYDGARVQVHKDGDRIIVYSRRLENVTRAIPEIVEAIKEAVKPEKAIVEGEL
VAIGENGRPLPFQYVLRRFRRKHNIEEMMKKIPLELNLFDVLYVDGASMIDTKFIDRRKK
LEEIVEPNGKIKIAENLITKKVEEAEAFYKKALEMGHEGLMAKRLDAVYEPGNRGKKWLK
IKPTMENLDLVIIGAEWGEGRRAHLLGSFILGAYDPETGEFLEVGKVGSGFTDEDLVEFT
KMLKPLIIKEEGKRVWVEPKIVIEVTYQEIQKSPKYRSGFALRFPRYVALRDDKGPEDAD
TIERIAQLYELQERMKGKV
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgaggtaccttgagctggcccaactctatcaaaagttagagaaaaccaccatgaagctg
ataaagaccagacttgttgcagattttcttaaaaaagttccagacgatcaccttgaattt
attccatacctaatccttggagacgtctttccagagtgggacgagagagaactgggcgtt
ggcgagaagttgctcataaaggccgttgccatggcaacgggcgttgatgctaaggaaata
gagaactctgtgaaagataccggtgatctaggagaaagcatagcacttgccgtgaagaaa
agaaagcaaaggagcttcttctcgcaaccactaacgatcaagagagtatatcaaacccta
gttaaggttgcagaaacaacgggagagggaagtcaagaaaagaagatgaagtacttggca
aacctcttcatggatgccgaaccaattgaagcaaagtacatagcgagaacagtcctggga
accatgagaactggtgtcgctgagggcttactaagggatgctatagcattggcattccac
gttaaggtagagctcgttgagagggcgtacatgctgacaagtgattttggattcgtagct
aaggttgcaaagttagagggtaacgaaggattagcaaaggttacgatacagataggaaag
ccaataaagccaatgctggcacagcaagccgccaacataaaggaagcccttctcgagatg
ggcggggaggccgagttcgagataaagtatgatggagctagagtgcaggttcataaagat
ggagacaggataatagtttactcaagaaggctggaaaacgtcacgagagcaattccggag
atagtggaggctataaaagaggcagtaaagccagaaaaggcaattgttgaaggagaactc
gtggcgataggggagaacggaagaccactacctttccagtatgtcctaaggaggtttagg
aggaagcataacatagaggagatgatgaagaagataccgctcgaactaaacctcttcgac
gttctctacgttgatggtgccagcatgatagacaccaagttcatagataggaggaagaaa
ctcgaggagatagtagagccgaacggaaagataaagatagccgagaatttaataacgaag
aaagtcgaagaggcggaggcattctacaagaaggccctcgagatggggcatgaggggcta
atggcgaagaggctcgatgcagtttacgagccaggtaacagaggtaagaagtggctcaaa
ataaagccaactatggaaaacctcgacctcgttataatcggagcagagtggggagaggga
cggagagcacacttactaggatcgttcatcctgggggcctatgatccagaaaccggggaa
ttccttgaagtcggaaaggtcggaagcggattcacggacgaagacctagtggagtttacc
aagatgctgaaacccctgatcatcaaagaagaaggaaagagggtgtgggtcgagccgaag
atagttattgaagtgacataccaggagatacagaagagccccaagtataggagcggattc
gccctaaggtttcccaggtacgttgccctgagagacgacaaggggccagaggatgcggat
acaatagaaaggatagcccagctgtacgagttgcaggaaagaatgaaaggaaaagtttaa

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