Paenibacillus yonginensis: AWM70_01385
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Entry
AWM70_01385 CDS
T04810
Name
(GenBank) DNA polymerase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
pyg
Paenibacillus yonginensis
Brite
KEGG Orthology (KO) [BR:
pyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AWM70_01385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyg03400
]
AWM70_01385
Enzymes [BR:
pyg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AWM70_01385
DNA repair and recombination proteins [BR:
pyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AWM70_01385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
ANS73401
UniProt:
A0A1B1MW40
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All DBs
Position
complement(321811..322701)
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AA seq
296 aa
AA seq
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MPAAVKGSIQIEGQEIIISNLDKLLWPEAGVTKLIYLQKLAELAPFLLRRCRNRLLTTIR
YPGGIHGSFFYQKNAPQPLPDFVTTAEHEGIRYVVLDSLPTLLWMGNLASIEFHPSLHYI
GQTLPCEWIIDLDPSVEEEPRIMEAASYVGDCLSSLGLESVPKTSGATGVQIIVPIHYGI
TFDELRAIGHFVARYVTEKHPDLFTIERLKKDRGNRIYFDYLQHYSGKTIASAYTPRAKK
AASVSTPLTWDEVRRNPKPSDYHLLNIGARLKQTGDLLEQVPPQSLELILKHLLNK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgctgtaaaagggtccattcaaattgaaggccaagaaatcatcatttccaat
ctggacaagctgctttggccagaagccggagtgaccaagctgatttatctgcagaagctg
gccgagctggccccgttcctgctgcgaagatgccgcaaccggctgctgacgacgattcgt
tatccgggcggcatccatggttcttttttctatcagaaaaatgctccgcagccgctgccg
gactttgtgaccacggccgagcatgaaggcatccgctacgttgtgctcgacagcctgcct
actttgttatggatgggcaatctggcctcgattgaattccatccttcgctgcattatatc
ggtcaaacgcttccctgcgagtggattatcgacctggatccttccgtagaggaggagccg
agaattatggaggcggcgagttacgtaggcgattgtctatcctcacttggattggagtcg
gtgccgaagacttccggggcaaccggcgtacagattatcgtacccatccattatggaatc
acctttgacgagctgcgtgccatcgggcattttgtcgcccgttatgtcacggagaaacat
cccgatctgtttacgatcgagaggctgaagaaggaccgggggaaccggatttattttgat
tatctccagcattattccggcaaaacgatcgcttccgcttatacgccccgcgccaagaaa
gcggccagcgtctccacgccgctaacctgggacgaggtccgccgcaacccgaaaccttcc
gactatcatctgctgaacatcggagcaaggctgaagcaaacaggcgacctgttggaacag
gtccctcctcaatcactcgagttgatcttaaaacatttattgaataaatga
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