Phormidium yuhuli: NEA10_10785
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Entry
NEA10_10785 CDS
T08410
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pyh
Phormidium yuhuli
Pathway
pyh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEA10_10785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyh03400
]
NEA10_10785
Enzymes [BR:
pyh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NEA10_10785
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NEA10_10785
DNA repair and recombination proteins [BR:
pyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NEA10_10785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
zinc-ribbons_6
UT
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
USR89380
LinkDB
All DBs
Position
complement(2514677..2515558)
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AA seq
293 aa
AA seq
DB search
MPELPEVETVRRGLNAHTCQQRICGGTVLLNRSLASPAHANDFIEGMQGQSIRTWHRRGK
YLIAQLGEDDSCDRLGPTADGWLGVHLRMTGQLLWCHPEDPLEKHTRVRLFFEGDRELRF
VDIRTFGRLWWVPPHTSPHTVMTGLLSLGPEPFSPEFSSDYLISTLANRRKPIKTALLDQ
TIVAGVGNIYADESLFLSGIPPTRLCSQLTPDEIDRLRQQVIDVLSQAIEAGGTTLRDFR
DVTGINGNYGGMAWVYNRNGQPCRQCGTPIARIKLGGRSSHFCPSCQPDPKTP
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaacttcctgaagttgaaactgtacgtcgtggcttaaatgcccatacctgccag
caacggatttgtggagggactgttctcctcaaccgcagtctggccagtcccgctcatgct
aatgactttatcgaggggatgcaaggtcaatccattcgaacttggcatcggcgggggaaa
tatctcattgctcaactgggtgaggatgactcttgcgatcgcctcggtcccacggcggat
ggttggttgggggtccatctgcggatgacgggacagcttctgtggtgccatcctgaagac
cccttagagaaacatacccgagtccgcttattctttgagggcgatcgcgaactgcggttt
gttgatattcgcaccttcggccgcctctggtgggttcctcctcacacctccccacatacc
gtcatgacgggcctcctcagtttagggcctgaacccttcagccctgagttttccagcgat
tacctcattagcaccctcgccaatcgccgtaaacccatcaaaactgccctccttgaccaa
actatcgtcgccggagtgggtaacatctatgctgacgagagtttattcctcagtgggatt
ccccccacccgcctctgtagccaactgaccccggacgagatcgatcgcctacgacaacag
gtgatcgacgttctcagccaagccattgaagcggggggaacgacgttacgggattttcgg
gatgtgacgggtatcaatggcaactatggcggtatggcttgggtgtataaccgcaacgga
caaccctgtcgtcaatgtgggacccccattgcccgaattaaactgggggggcgatcgtcc
catttttgtccctcctgccagcctgaccccaaaacgccctaa
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