Pseudomonas yamanorum: AK972_6050
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Entry
AK972_6050 CDS
T05821
Name
(GenBank) Uncharacterized protein ImpH/VasB
KO
K11895
type VI secretion system protein ImpH
Organism
pym
Pseudomonas yamanorum
Pathway
pym02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AK972_6050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pym02044
]
AK972_6050
Secretion system [BR:
pym02044
]
Type VI secretion system
Imp/Vas secretion system core components
AK972_6050
BRITE hierarchy
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GFIT
Motif
Pfam:
T6SS_TssG
A_deaminase_N
Motif
Other DBs
NCBI-ProteinID:
AMW86850
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All DBs
Position
complement(6746632..6747624)
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AA seq
330 aa
AA seq
DB search
MHQEPWEYDFFQALRRIECESPELPRLGHSLRLADDPLRLGQQADCTFAPATLASVEPGA
EGQPARLEQFFFGLGGPNGPLPLHITEYVRERQRNNADSTSKRFLDVFHHRLLTLFYRAW
AEARPTVSHDRPDDDYWSARLAALSGRGTPSLLNQGLIPDTAKLHYSGHLSAQTRYPDGL
KAILGEYFGLPVEIEEYVGQWLELPERSRVSVSANQLGVDFCLGSHVWDRQHKFRIRLGP
LKLDAYMGMLPGSQPFNELVAWVAEYLGHELDWDLNLILQQPEVPALQLNGQFRLGFNTW
LGQPEHDANDLILARHYAEHANTSRNPEHG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggagccctgggaatatgacttcttccaggcgctgcgtcgtatcgagtgcgaa
tcgccggagctgccacgcctggggcattccctgcgcctggcggatgatccgctgcgtctc
ggtcagcaggccgattgtacctttgcgccggccacactggcctcggtcgaacctggggct
gaaggccagccggcacggctggagcagttcttcttcggcctcggcggccccaacggcccg
ctgccgctgcacatcaccgagtacgtgcgtgagcgccagcgcaacaacgccgacagcacc
agcaagcgcttcctggatgtgttccaccaccgcctgctgaccctgttttatcgggcctgg
gccgaggcgcggcctaccgtcagccatgaccgcccggacgatgactactggtcggcgcgc
ctcgcggcactgagcggtcgcggtacaccgagcctgctcaaccagggcctgatccccgac
acggcgaagctgcattacagcggccacctgtcggcgcaaacccgctacccggatggcttg
aaagcgattcttggcgagtacttcggcctgccggtggagatcgaagaatacgtcggccaa
tggctggaactgcccgagcgcagccgcgtgagtgtcagcgccaaccagctgggcgtggac
ttttgcctgggcagccacgtgtgggaccgccagcacaaattccgtatccgcctcggcccg
ctgaagctcgatgcctacatgggcatgctgcccggcagccagccgttcaacgagctggtg
gcgtgggtcgccgagtacctgggccacgaactggactgggacctgaacctgattctgcaa
caaccggaagtgccggccctgcaactcaacggccagttccgcctgggcttcaacacctgg
ctcggccaacccgagcatgacgccaacgacctaatcctggcccggcattacgccgaacac
gccaacacctcaaggaatccagagcatgggtga
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