Puma yagouaroundi (jaguarundi): 121017318
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Entry
121017318 CDS
T07555
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03030
DNA replication
pyu03420
Nucleotide excision repair
pyu03430
Mismatch repair
pyu03440
Homologous recombination
pyu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121017318 (RPA1)
03420 Nucleotide excision repair
121017318 (RPA1)
03430 Mismatch repair
121017318 (RPA1)
03440 Homologous recombination
121017318 (RPA1)
03460 Fanconi anemia pathway
121017318 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pyu03000
]
121017318 (RPA1)
03032 DNA replication proteins [BR:
pyu03032
]
121017318 (RPA1)
03400 DNA repair and recombination proteins [BR:
pyu03400
]
121017318 (RPA1)
Transcription factors [BR:
pyu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121017318 (RPA1)
DNA replication proteins [BR:
pyu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121017318 (RPA1)
DNA repair and recombination proteins [BR:
pyu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121017318 (RPA1)
MMR (mismatch excision repair)
121017318 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
121017318 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
121017318
NCBI-ProteinID:
XP_040311435
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEGEQLSSNCICQINRFIVNTLKDGRRVIILMELDILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSLASAANPPASKPQQQNGSSGMGSTASKTYGASKTFGKAGATNLVNTGSGG
TQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFN
EQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDGHHLPTVQ
FDFTAIGDLENKSKDSLIDIIGICKSYEDATKIIVKSNNREVSKRDIYLMDMSGKVVTTT
LWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEG
QALDGVSISDLKSGGTGGSNTNWKTLYEVKSENLGHGDKADYFSCVATVVFLRKENCMYQ
ACPAQDCFKKVIDQQNGLYRCEKCDSEFPSFKYRMILSANIADFQENQWVTCFQESAEAI
IGQTTAYIGELKEKNEQAFEEVFQNANFRTFIFKIRVKLETYNDESRIKATVMDVKPVDY
REYGKRLIMNIKRNALMM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagacacttcc
ataaaacctgtcctccaggtcattaacatccgtcccatcactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctctcctctttcatgttggcaaca
cagttgaaccatctcgttgagggagaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtaattattttgatggagttagac
attttgaaatcagccgaagcagttggattaaagattggcaatcccgtgccctataatgaa
ggacacgggcagcagcaggtagttccttctctggcctcagcagccaacccaccagccagc
aagccccagcaacagaatgggagctcagggatgggttccactgcatctaagacttatggt
gcctcaaagacatttggaaaagctggagctaccaacctagtgaacacaggttctggagga
acacaggtcaaagtggtacccatcgccagcctcaccccttaccaatccaagtggactatc
tgtgctcgagttaccaacaaaagtcagatccgtacctggagtaattcccggggggaaggg
aagctcttctccctagaactggttgatgaaagtggtgaaatcagagctactgctttcaac
gagcaagtggacaagttttttccccttattgacatgaacaaggtctattacatctctaaa
ggcaccctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgacc
ttcaataatgagacttccgtcgtgccctgtgaagatggtcatcatttaccaacagttcag
tttgatttcacagcgattggtgacctggagaataagtctaaagattctctgatagacata
attgggatctgcaagagctatgaagatgccaccaaaatcatagtgaaatctaacaacaga
gaagtttcgaagagagacatctatttgatggacatgtcagggaaagtggtgaccactact
ctgtggggagaagatgctgatagatttgatggttctagacaacctgtgatggctatcaaa
ggagccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtc
attgtgaatcctgacatcccggaggcctataagcttcgtggatggtttgactctgaagga
caagccttagatggtgtttccatctctgatctaaagagtggaggaacaggaggtagcaac
accaactggaaaactctatatgaggttaaatcagagaacctaggccatggtgacaaggcc
gactattttagctgtgtggcgacagttgtgtttcttcgcaaagagaactgtatgtatcaa
gcctgcccagctcaggactgctttaagaaagtgattgatcaacagaatggattgtaccgc
tgtgagaagtgtgatagtgaatttcccagcttcaagtaccgcatgatcctgtcagcaaat
attgctgattttcaagagaatcagtgggtcacctgtttccaggagtctgcggaggccatc
attggacaaaccactgcttatattggggagttaaaagagaagaatgagcaagcatttgag
gaagttttccagaatgccaacttccgaactttcatattcaagatcagggtgaaactagag
acctacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactac
agagaatatggcaaaaggctgatcatgaacatcaagagaaacgcactgatgatgtga
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integrated database retrieval system
