Quercus lobata (valley oak): 115971385
Help
Entry
115971385 CDS
T07350
Name
(RefSeq) homeobox-leucine zipper protein ATHB-8
KO
K09338
homeobox-leucine zipper protein
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115971385
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
115971385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
MEKHLA
Homeodomain
FtsL
bZIP_1
Homeobox_KN
HALZ
DUF5743
KIP1
Motif
Other DBs
NCBI-GeneID:
115971385
NCBI-ProteinID:
XP_030947138
LinkDB
All DBs
Position
12:complement(41243405..41251875)
Genome browser
AA seq
836 aa
AA seq
DB search
MMAVSSSCNKLQMDNGKYVRYTPEQVEALERLYHDCPKPSSMRRQQLIRECPILSNIEPK
QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQH
TQNATLATTDTSCESVVTSGQHHLTPQHPPKDASPAGLISIAEETLTEFLSKATGTAVEW
VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPTWFHGCRAVDVI
NVLSTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM
PQVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTT
MAALRHLRQISQEHSQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSMLESDGI
DDVTILVNSSPAKMMGGNLSYANGFQSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEW
ADSSIDAYSAAAIKAGPCSLPGVRAGSFGGQVILPLAHTIEHEEFMEVIKLESMGHYRED
MMMAGDIFLLQLCSGVDENAVGNCAELIFAPIDASFSDDAPIIPSGFRIIPLDSGIDSSS
PNRTLDLASALEVGPTGNRASGENSGQCGSTKSVMTIAFQFAFEIHLQDNVAAMARQYVR
SIIASVQRVALVLSPSHFGSHAGIRPPPGTPEAHTLARWICQSYRCYLGVELLKSEGSES
ILKTLWHHSDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCS
EFPQIMQQGFMCLQGGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagtgagttcatcctgcaataagctgcaaatggataacggcaagtatgtgagg
tacacgcctgagcaagttgaggctcttgaaaggctctaccatgactgccccaagccaagc
tccatgcgccgccaacagcttatcagggagtgtcccattctctccaacatcgagcctaag
cagatcaaagtttggttccagaaccgaagatgtagagaaaagcagcgaaaagaggcgtca
cgcctgcaagctgtgaataggaagctgacggcgatgaataaacttttaatggaggagaat
gatcggttgcaaaagcaggtgtcacaactggtgtatgagaacagttatttccgtcaacac
acgcaaaatgcaacccttgccaccacagacacgagttgtgagtcggtggtgacgagcggt
caacaccatctgacacctcagcatccaccaaaggatgctagccctgcaggacttatatcc
attgcagaggagactttaacagagtttctttcgaaggctactggaactgctgtggagtgg
gtccaaatgcccgggatgaagcctggtccggattccattggaatcgttgctatttctcat
ggatgcactggagtggcagctcgtgcatgtggccttgttggtctagaacctacaagagtc
gctgaaatcctcaaagatcggcctacatggttccatggttgccgagctgtggatgttata
aatgtgttgtccactgcaaatggtggaaccattgaactgctttacatgcagctatatgca
cccacaactttggcaccagctcgtgacttctggttgctgcgctacacgtctgttttggaa
gatggtagtctagtggtctgtgaaagatcacttaacaatactcagaatggaccaagcatg
ccacaggtgcagcatttcgtgagagcagaaatgctgccaagtgggtatctgattagacct
tgtgaagggggtggatcaattattcatatagttgatcatatggatttagagccttggagt
gtacctgaagtgttgcgcccactttatgagtcatcaactctacttgctcagaagacaaca
atggcagcattgcgacatttgaggcagatctctcaagaacattctcagccaaatgtctct
ggttgggggaggagacctgctgctctacgtgcacttagccagagattaagcaaggggttt
aatgaagcagttaatgggtttacagatgagggatggtctatgttagaaagtgatggtatt
gatgatgttaccattcttgtgaactcatctccagccaagatgatgggtggaaatctttct
tatgccaatggatttcaatcaatgagcaatgcagttctatgtgccaaggcatccatgtta
ttacaaaatgtgcctcctgcaatacttcttagatttctgcgagaacaccggtctgagtgg
gcagacagcagtattgatgcttactcagcagctgccattaaagctggtccttgtagctta
cctggagttagagctggaagttttgggggtcaggtcattcttccactggctcacacaatt
gagcatgaagagtttatggaggtcattaagcttgaaagtatgggccactatcgggaggac
atgatgatggctggtgacatcttccttttgcaactttgtagtggagtggatgagaatgct
gtgggaaactgtgcagaactcatctttgctcccattgatgcctcgttctctgatgatgca
ccaattataccttctggtttccgcattattcctcttgattctggaattgattcctctagt
ccaaaccgtacacttgaccttgcctctgctcttgaagttggacccactggaaacagagca
tccggtgaaaattctggtcagtgtgggagcaccaaatctgtgatgacaatagcattccag
tttgcatttgaaatccaccttcaagacaatgtagcagccatggctagacaatacgtccgg
agcattatagcatctgtgcagagggtggcattggtgctctctccttctcattttggttct
catgctggtattcggccgccacctggcactcctgaagctcacacgcttgcccggtggatc
tgtcaaagctataggtgctatctaggggttgaactacttaaaagtgaaggaagtgaatcc
attctcaaaactctttggcatcactcagatgcagtcatgtgctgctctttgaaggcactg
ccagtttttacatttgcaaatcaagcaggtcttgatatgcttgagacaaccttggttgca
cttcaagacattactttggaaaagatttttgatgacaatggaaagaaaaccctatgctca
gagttcccacagataatgcagcagggttttatgtgtcttcaaggtggtatttgcttatct
agcatggggaggcccatctcctatgagagagcagtggcgtggaaggtgttgaatgaagaa
gagaatgctcactgtatctgcttcatgttcatcaactggtcttttgtctaa
DBGET
integrated database retrieval system
