Quercus lobata (valley oak): 115975747
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Entry
115975747 CDS
T07350
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
qlo
Quercus lobata (valley oak)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
UBA_4
Motif
Other DBs
NCBI-GeneID:
115975747
NCBI-ProteinID:
XP_030952521
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All DBs
Position
2:49265911..49303019
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AA seq
1433 aa
AA seq
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MASSSKTLTLDSSHLFLAALQSQSQSLPPPSPLSLSTPIPSSSSYPPSKLIPNTRFLVDA
FRGDSSFSVSYFLSHFHSDHYAGLSPTWSKGIIFSSPTTALLLTRVLKLPSPFVSPLPLR
QTVVIDGCQVTLIDANHCPGAVQFLFNIPGPNGGRYVHTGDFRFSHSMRFDSFLTQFIGS
DAVFLDTTYCNPKFVFPSQDESIDYVVSVIDRVRVGVGVGGEGDSLRDVLFLVATYVVGK
ERILLEIARRCNRKIHVDARKMEVLRVLGYGESGLFTEDVCESDVHVVGWNVLGETWPYF
RPNFVRMKEIMDERGYSKVVGFVPTGWTYEVKRNKFAVRTKDSFEIHLVPYSEHSNYDEL
REYVKLLKPKRVIPTVGLDVENLDSKHADKMQKHFAGLVDEMANKQEFLRGFFRGSCEVV
DKVERDASTNEELDKENEIKETKAKGSDIKEPGTQDPVVLNDEDISSLQQSSSQDPVMLT
DEDTEKLVQELRDCLPTWVTHNQILDLISSSGRNIVEVVSNFYERETEFHEQVLASTATK
SVSTSQSSSLNVSASLSQAGFVMSSPIGGIDNALSKVYKSANLKHSCKSNISLGKGKGTI
DNKPNKKVKVNSIKSGTSPGKRKMNVENKTNKKVNSKLESGGSKQSTITSFFSKVLPDVS
EGGKVGTLFEQSPIDENLLPDDSAKFYRDEIDQFIQIINGNESSRSCAATILEKTKGDIN
KALDIYFCNHEGDLGDSNKSVLVQSSVNNCSPGQKKNVLEKEHVPDISLQSTLTKDVDAT
PVSLPPEKYNPTEHACWRSGQPAPYIHLARTFDQLEDEKGKIKATSMLCNMFRSLLALSP
EDVLPTVYLCTNKIAADHENIELNIGGSLVSSALEEACGTNRTKLKEMYNKIGDLGDVAQ
ECRQTQTLLAPPSPLLIRDVFSALRKISVQTGSGSTVRKKNVIVNLMCSCREKEMKFLVR
TLVRNLRIGAMMRTVLPALAQAVVFNSSPNFYHEGKVDNLKENLQFLSAAVVEAYNILPN
LDLVVPSLMNKGVKFSSSTLSMVPGIPIKPMLAKITNGVPQALKLFQNKAFSCEYKYDGQ
RAQVHKLVEGTIRIFSRNGDESTSRFPDVINIMKESCRPAAMTFILDAEVVAVDRKNGFK
LMSFQELSSRGRGSKDNLITVDSIKVDICVFVFDIMFANGQQLLGFSLRKRRKYLKDLFH
DEKLGYFEYAKEMTVEADDACLTNEVTLNKISSFLEDAFRSSCEGLVVKLLDFDAEYSPS
KRTDTWLKVKRDYVEGLCDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEEFQSVCRV
MSGFSDSFYIEMKDFFSGDKILSKKPPYYRTAEVPDKWFLPELVWQIRGADFTLSPVHQA
AIGLVHPSRGISIRFPRFINPVSDRNPEESSTAADIAEMFQSQTRKMDVTSEA
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcctcgaaaaccctaacgctagactcctcccacctcttcctggccgctctc
caatcccaatcccaatcattaccaccaccatcacccctctctctttctactcccattccc
tcctcctcctcctatcccccttccaaactcatccccaacacccgtttcctcgtagacgcc
ttccgcggcgattccagtttctccgtctcctacttcctctcccacttccactctgatcac
tacgctggcctctcccccacctggtccaaaggcatcatcttctcttcccccaccaccgcc
cttctcctcacccgcgttctcaaactcccctccccctttgtctcccctttaccgctccgc
caaactgttgtcattgacggctgtcaggtcaccctcattgacgccaatcactgccctggt
gccgtccagttcctcttcaacattcctggccccaacggtggcaggtatgttcacaccggc
gattttcggttttctcattccatgagatttgactcttttctaactcaatttattggttct
gatgctgttttcttggatactacttattgtaatcccaaatttgtgtttccttcccaagat
gagtctattgattatgttgttagtgtgatcgatagagtaagagtaggagtaggagtagga
ggtgagggtgattcattgagggatgttttgtttcttgtcgctacttatgttgttgggaaa
gagaggattttgctcgagattgcacggaggtgtaatcggaagatacacgtcgacgctagg
aagatggaggttttgcgtgttttggggtatggcgagagcgggttgtttacagaggacgtg
tgtgaaagtgatgttcatgttgttgggtggaatgttttgggtgagacatggccgtatttt
aggcctaatttcgtgagaatgaaggagatcatggatgaaagaggctactctaaggttgtg
ggttttgttccgacaggctggacttatgaagtgaagcgcaataagtttgctgtcagaact
aaggattcctttgagattcatcttgttccgtatagtgaacattcaaactatgacgaactt
agggaatatgtgaagttattaaaaccaaagcgtgtcattcctaccgtgggtttggatgtt
gaaaaccttgatagcaagcatgctgataaaatgcaaaagcattttgcagggttagttgat
gaaatggccaataagcaagagttcttaaggggtttttttcgagggtcctgtgaagtggtt
gacaaggttgaaagagatgccagcactaatgaggagctggacaaggagaatgagatcaag
gaaactaaggcaaagggcagtgatattaaagaacctggtacacaagatccagttgtgttg
aatgatgaggatatatcttctcttcaacaatccagttcacaagatccagttatgctgact
gatgaggacacggagaaactcgttcaggaacttcgtgattgtttgcccacatgggtcact
cacaaccagatattagatctgattagcagctcaggaaggaatattgttgaagtggtgtct
aatttttatgaacgtgaaactgaatttcatgagcaagtccttgctagtacagctacaaaa
tctgtgtccacttctcaaagtagctcacttaatgtctccgcttcactttcacaagcaggt
tttgttatgagtagtcctattggaggcattgacaatgctttaagtaaagtctataagtca
gccaacctgaagcattcttgtaagagtaatatttcccttggcaaaggtaaggggactatt
gacaataagccaaacaagaaagttaaagtcaattcaattaagagtggcacttctcctgga
aaaaggaagatgaatgttgagaataagacaaacaagaaggttaattcaaagttggaatct
ggtggttcaaaacaatctacaataacaagtttcttcagtaaagttttgcccgatgtttct
gaaggtggtaaggtaggaactttgtttgagcagagccctatagatgaaaatctgttgcct
gatgattctgccaaattttacagggatgaaatagaccagtttattcaaataataaatggc
aatgaatcatccagaagctgtgctgccaccattctagagaagacaaaaggagatattaat
aaggcgctggatatttacttctgtaatcatgagggtgaccttggtgactccaacaaatca
gttctggtgcagagtagtgtcaacaactgctctcctggccaaaagaagaatgtgctagag
aaagaacatgttcctgatatctctttgcagtcaacgttaacaaaggatgtggatgcaact
cctgtatcactacctccagaaaaatacaatcctacagagcatgcatgctggaggagtgga
caacctgctccatatatacatcttgcaagaacttttgatcaactagaggatgaaaaaggg
aagataaaagctacttctatgttgtgtaatatgttcagaagtttactggccttgtctcct
gaggatgtgctgcccactgtgtatttgtgcacaaataagattgctgcagaccatgaaaat
atagaactaaacattggtggaagtttggtctcctcagcactggaagaggcatgtggtaca
aaccggaccaaattaaaggagatgtataacaagattggtgatcttggtgatgttgctcaa
gaatgccgacaaacacaaacattacttgcccctccttcaccgcttctaattagagatgta
ttttctgcactccgaaagataagtgtacaaacaggcagtggaagtaccgttcgaaagaaa
aatgttattgtgaatctcatgtgttcttgtagagagaaggagatgaagtttcttgttaga
actttggtcagaaatttacggattggagcaatgatgagaactgttttacccgctctagct
caagccgttgtttttaattcctcccctaacttttaccatgaaggaaaagtagataatttg
aaggagaatcttcagttcctttctgcagccgtagttgaagcctataatatactccccaat
ttggatctggttgttccttctctcatgaacaaaggtgtcaagttttcttcttcgactttg
tcaatggttccaggaatacccatcaagcctatgcttgcaaaaatcaccaatggtgttcct
caagcactgaagctcttccagaataaagctttttcatgtgaatataaatatgatggtcag
cgtgcccaagttcacaaattagttgagggaactattcgcatattttcacgaaatggagat
gaatcgacctcaagatttccggatgtgattaatataatgaaggaatcatgcaggcctgct
gcaatgactttcattctggatgcggaggttgttgcagttgataggaagaatggcttcaaa
cttatgtctttccaagaattatcttctcgagggagaggaagcaaagataacttgattact
gtggatagcataaaggttgacatttgcgtgtttgtcttcgatatcatgtttgctaatgga
cagcagctgttgggtttctctctccgcaaaagacgaaaatatttgaaggatttgtttcat
gatgagaagttgggatatttcgaatatgcaaaggaaatgacagttgaagcagatgatgct
tgtttgaccaatgaagtcacattaaataagataagctcttttcttgaagatgcattccgc
tcctcatgtgaagggcttgtggttaaattattagattttgatgctgaatattctccatct
aagcggactgacacatggttaaaggtcaagcgagactatgttgaaggattgtgtgattct
cttgatttagtcccaattggtgcctggcatggaaatgggagaaaagctggatggtacagt
ccatttcttatggcatgttacaaccctgacacggaagaattccaaagtgtatgccgcgtc
atgtccgggttctctgattctttttacatagagatgaaagatttcttttctggggacaag
attctgtccaaaaagcctccttattatcgaacagctgaggtgcctgataagtggtttttg
ccagaacttgtttggcaaataagaggtgcagacttcacactttcaccagttcatcaggct
gccattggtttagttcatccatctcgtggtatttcaatacgattccccagattcatcaat
cctgtgtctgatagaaatccagaagaatccagcacagctgcagatatagccgaaatgttt
caatctcagactcgaaagatggatgtgacatctgaagcttga
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