Quercus lobata (valley oak): 115978979
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Entry
115978979 CDS
T07350
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qlo01002
]
115978979
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115978979
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115978979
Peptidases and inhibitors [BR:
qlo01002
]
Cysteine peptidases
Family C85
115978979
Ubiquitin system [BR:
qlo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
115978979
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
115978979
NCBI-ProteinID:
XP_030956778
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Position
1:complement(11876547..11883553)
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AA seq
540 aa
AA seq
DB search
MTRILVQRGGSASNAGSSSNPNRNSNASFPGSSSARPESQPQPAPAPLKDEEIRDEVQEQ
VVVEEILEFCGTSDNKSAKSDDLSMERESFCNDQNEGLSDESADSEKAGSDESMGLGEEL
MKGMGGLRISERLAVETEGSSGNSSVTVCGSSHPPPPPVPPPKPSLGNSTSRRCVPGNSN
AMRIGSSRRAVAWPVVSTRTSPTGSRPSSPRSHGESEGYNSSDEQNPCNVSSYDDNERER
QFEIDIRRAKGFEVKRMLEDGNCLFRAVADQVYGDSEAYDLIRQMCIDYMERERDHFSQF
ITEGFTSYCKRKRRDKVYGNNMEIQSLSEMYNRPIHIYSYSTEPINIFHGSYNTDTPPIR
LSYHHGNHYNSLVDPRRLTIGAGLGFSCLRGRNVDKDQVKAAIKAQQDQQIDNALLAEGR
FYSDLELTEKEIERMVMEASRAEYLADDSYKQQLGCRESSTSGAEPSSSGASSETKVECG
RERGVQNYVLSNSMQTVLSMGFSYLQMIEAYSLFGEDVDSMVCYLLETGSSGRRKGKATE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgactcggattttggttcagcgaggtggttctgcttcgaatgctggttcttcttcaaac
ccgaataggaattctaatgcttcctttcctggctcttcttcagctcggccagagtcacag
cctcagcctgctcctgctcctttgaaagatgaggaaattagggatgaggtgcaagaacaa
gttgtggtggaggagatcttggagttttgtggtactagtgacaataagtcagcgaaaagt
gatgatctttcgatggaaagggaaagcttttgtaatgatcagaatgaggggctgagtgat
gaaagtgcagatagtgagaaagctggcagtgatgaaagtatgggtttaggagaagagttg
atgaaagggatgggagggctgagaatttcagagaggcttgcagttgaaacggagggttca
agtggtaattcttctgtgacagtttgtggtagttcacatccaccccctccgcctgtccca
cctccgaaaccttcattgggaaactcgacttctaggagatgtgtaccgggaaattcaaat
gcaatgcgtattggatcatccagaagagcagttgcctggcctgttgtttcaacaaggact
tcacccactgggtcacggcctagttctcccaggtctcatggtgaaagcgaggggtacaat
agctctgatgagcagaatccttgcaatgtttcatcctatgatgataacgaaagagaacgg
caatttgagattgatattagaagagcaaaagggtttgaagttaagagaatgctggaggat
ggaaattgtctcttccgtgctgtagcagatcaggtttatggggactcagaagcgtatgat
ttgatcagacaaatgtgcatcgactatatggagcgggaaagagatcacttttctcaattt
ataacagaaggttttacatcttattgtaagcggaagagaagagacaaggtctatggaaac
aatatggagatccaatccttatctgaaatgtataatcggccaatccatatttattcctat
agcacagaacctatcaacatctttcatggaagctataacacggacacacctcccattcgg
ctaagttatcatcatgggaatcattacaactctcttgttgacccacgtcgtttgaccatt
ggtgcaggacttggattcagctgtcttcgtgggagaaatgttgataaggatcaagtcaag
gctgcaattaaggctcaacaggaccaacagattgataatgcacttctagctgagggtcga
ttttactctgaccttgagctcaccgagaaggaaattgaacgcatggtgatggaagcctct
cgggccgagtatcttgcagatgactcatacaagcagcaacttggctgcagagaatcttct
acctctggtgctgaaccatcatcttctggagctagcagtgagaccaaggtggaatgtgga
agagagcgtggtgtgcagaattatgtccttagcaacagcatgcagacagttctgtcaatg
gggttcagttatctgcagatgattgaggcctatagcttatttggggaggatgttgattct
atggtctgttacttgttggaaactggcagcagcggcagacgcaaaggaaaggcaactgaa
tga
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