Quercus lobata (valley oak): 115980183
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Entry
115980183 CDS
T07350
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115980183
03036 Chromosome and associated proteins [BR:
qlo03036
]
115980183
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115980183
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115980183
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115980183
microRNA pathway
RISC loading complex
115980183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Cyclin_D1_bind
Motif
Other DBs
NCBI-GeneID:
115980183
NCBI-ProteinID:
XP_030958325
LinkDB
All DBs
Position
1:complement(14196222..14203451)
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AA seq
932 aa
AA seq
DB search
MPRRGGGRGRGRGTAPSSFSPVPSPAVSQPSSVASPSSSAPPPPQPSSSSVAELTSGVKE
RLTLQDRAAQPSSLKALVVPRRPGYGSVGKKIQVRANHFLVEVADRDIHHYDVTITPEIT
SKNVNQSVMTQLDTIYRETLFGNRRAAYDGRKSLYTAGALPFISIEIIVKLQNDDRPASS
SSSSARKERQFKVAIKLVSKPDLQHLKEFLVSRQSDVPQETIQVLAVVLRVEPSINYAVV
GRSFFHPSLATQGELGDGIDYWRGYYQSLRPTQMGLSLNIDVSARAFYEPLLVTDFLAKH
FRFNLSRHLSDQDRLKIKKALRGVKVELTHTEYAQSHKVTGVSTIPISQLMFTLDDKETK
TSVLQYFLEKYDIVLQYASLPALEAGSDSNPVYLPMEVCKIAAGQRYTKRLNERQVTNLL
RATCQRPIERERSITGMVKRNDFSRGKLVHEEFGIEVREGLTTVDARVLPSPMLNYHETG
RESREHPKMGQWNMINKKMVNGGRVSYWTCVNFSTRVNRDFPFQFCDELVNMCNSKGIDF
NLDPLIPIHSAHPGQVDRALMYIHEQCAAKLKEIEPGKQLQLLIIILPDVTGSYGKIKRI
CETELGIVSQCCQPKQASKLSKQYLENLALKINVKAGGRNNVLTDAIQKRMPLVSDRPTI
IFGAGVTHPLPGEDSSPSIAAVVASMDWPEVTKYRGLVSAQEHREEIIQDLYKSVQDPQR
GLVHGGLIREQLIAFRRATGQKPHRIIFYRDGVSEGQFSQVLLYEMDAIRKACLSLEENY
LPKVTFVVVQKRHHTRLFPTDNQTDRSGNIQPGTVVDTKICHPTGFDFYLNSHAVIQGTS
RPTHYHVLYDENNFTADLLQGLTNNLCYTYARCTRSVSIVPPVCYARLAALRARYYIEGD
TSDGGSTGGENRAEFRPLPLIKDNVKDVMFYC
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgccacgacgtggcggtggaagaggcagaggccgcggtactgctccttctagtttctct
ccggtgccttctccggctgtttcacaaccatcatctgtcgcttcaccgtcgagttccgct
cctcctccgcctcagccatcgtcatcctcggtggctgaactgaccagtggtgtcaaagag
agactcacgttgcaggatcgagcggctcagccttcgtccttgaaagccttggtcgttccg
agaaggcctggctacggaagcgtcggaaagaaaatccaagtccgagcaaatcattttctc
gttgaagtcgccgatagagatatccaccactacgatgtgaccataacgcctgagataact
tcaaagaacgtgaatcagagtgtaatgactcagctagacacaatctaccgagagacactt
tttggtaacagaagggctgcttatgatggcagaaagagcctttatactgcaggagcattg
ccatttatatccatagagatcattgtcaagttacaaaatgatgaccgtcctgcatcttca
tcttccagctctgcgagaaaagaacgccaattcaaagtggcaattaagttggtttctaag
cctgacttacagcatctgaaagagtttttagtcagtaggcagtcagatgttccgcaagaa
acaattcaagttctcgctgtggtactcagagtggaaccatcaattaactatgctgttgtg
gggaggtcattttttcatcctagcttggctacacaaggtgaattgggtgatggtattgat
tactggagaggctactaccaatctctcaggccaacacagatggggctttctctaaatata
gatgtgtcagccagagcattctacgaaccacttcttgtgactgactttcttgcaaaacat
ttccgttttaatctgtcaaggcatctgtctgatcaggaccgtcttaagattaaaaaggca
ttgagaggagtaaaagttgagcttactcatacagagtatgcacaaagtcacaaagtcact
ggtgtttcaacaataccaattagccagttaatgtttacccttgatgacaaggaaacaaag
acatcagttcttcaatattttcttgagaaatatgacattgttctccaatatgcgtctttg
cctgcccttgaagctggtagtgattcgaatccagtttacttaccgatggaggtttgtaag
attgctgctggacagagatacactaagagattaaatgaaagacaggtaactaacctacta
agagcaacatgtcaacggcctattgaaagggaacggagtatcacagggatggtaaagcga
aatgattttagtagaggtaagcttgtgcatgaggaatttggaattgaagtacgagaagga
cttacaacggttgatgcacgagtgttgccatctccaatgcttaattatcatgaaactggg
agagaatcaagggaacatcctaagatggggcaatggaatatgataaacaagaaaatggtc
aatggtggtagagtgtcatattggacatgtgtgaatttctctactcgagtgaacagagat
tttccgttccaattctgtgatgaattggtcaacatgtgcaacagcaaaggaattgatttt
aacctagaccctttgataccaatacattcagctcatcctggtcaagttgatagggctctc
atgtatattcacgagcagtgtgcagccaaacttaaagaaattgagccaggaaaacagctt
cagctgttgataattattttgcctgatgtcactgggtcatatgggaagattaaacgtata
tgtgaaacagaactaggaattgtttctcagtgctgtcagcccaagcaagcatcaaagctt
agtaagcagtaccttgaaaatttggctctcaagatcaatgtgaaggctgggggacgtaac
aatgtgttaactgatgctattcaaaaaagaatgcctcttgtatctgatcgccctacaatt
atatttggtgcgggtgtgacacatccactaccgggagaggactctagcccttcgatagct
gcagtagtggcttctatggattggccggaggtaaccaaatacagaggactcgtctctgct
caggagcaccgtgaagaaattatccaggatctctataaatcagtgcaggatcctcaaagg
ggtttagttcatggaggcttgatcagagaacaacttattgccttcagaagagcaaccggg
caaaaaccccacaggattattttctacagagatggtgttagtgaaggtcaatttagtcaa
gttctgctttatgagatggatgcaataagaaaggcctgtctctcactagaggaaaattat
ctgccgaaagttacttttgttgttgttcagaaaagacatcatacacgcctttttcctaca
gataatcagacagacaggagtggcaatattcaaccaggtactgttgtcgatactaaaatt
tgccatccaactgggtttgacttctaccttaacagccatgctgtaatacaggggactagc
cgccctacgcactatcatgtgttgtacgatgagaacaattttactgcagatctgttacaa
gggctaaccaataatttgtgttacacgtatgcaaggtgcactcgatcagtttccatagtt
cctcctgtatgttatgcccgtttagcagctttacgagcacgctattacattgagggtgat
acatcagatggcggttcaactgggggtgagaacagagcagagttccggccccttcctctg
atcaaggataacgtcaaagatgtcatgttttattgctga
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