Quercus lobata (valley oak): 115987453
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Entry
115987453 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115987453
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115987453
03036 Chromosome and associated proteins [BR:
qlo03036
]
115987453
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
115987453
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115987453
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
115987453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
Motif
Other DBs
NCBI-GeneID:
115987453
NCBI-ProteinID:
XP_030966855
LinkDB
All DBs
Position
4:79660413..79667877
Genome browser
AA seq
823 aa
AA seq
DB search
MSRFILKIFPCILCFMKSFLRKLFLGSHSSSSPSAGNNDLVYEPPPESHPSASSSYPIEV
VVDPVTVKPQHVQSSSQRTGQISQNSKESGPLLPIFSSKQPTLSCTPLQSPSKPSPSSSN
IPESSLISSSVTVKPQHVQSSSQSVANEVSHSSKISNPGPPTISSRPLQSPSKPSPSSSN
IPQSSLTSSSVTVKPQHVQSSFQSITNEVSHSSKVSSPVPPTISSTPLQSPSKPSASSNN
LWLYHLSQLPPTFSSNSSNPLPPTFSSRQPADSSNLSQSSSKPPPLSSSPSPSSLKTPVD
SSISYAYFPKTTEPPSASSSPTSYKPPQSSPSAVPYSSKPPPSSSGPPLYSTKQTPVFKL
ILHTAPNNVTNEESKTTYVCEKGAPIYAIPEDIKDLIKEDIAPPVLKQSLSPSTYKAYFA
ALLYAEDYYLEKWSEFLMKKVTLKLEEAALHKKSKKSKHSKGSGEEEDKIFVEFEIDSIP
GRRPFLLSRDVVRARPSDKKVEPFQGFIHRVVKSRRVLVEFGDDFHSQHHPNRKYDISFS
FNRVCLKRAHQAIQAALDPSSHNFLFPECVPRKNILNPPALLETYDGLNTNEFDAVRRIL
SFQGSPPYLLGGPLIGTDAQRYLPEEKVSTRTGVVVCKAVIEIYKTSKENRILICAPINR
TCDMLMRSLREVIRESDMFRANAAFREIDGVPIDILRSCPIKDECFACPPLQKLQKFRII
LSTFVSSFRLHNQGIAAGHFSHIFLVDASSTTEPEATIALANFANENTSVIVTGKPGNCS
RWVRSDMARKYGLRKSYFERLCEVGPYQILNPMFITELVGFEQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggtttattcttaaaatcttcccatgcatcctttgtttcatgaaatctttcctt
agaaaactatttctggggtctcattctagtagtagcccttctgctgggaacaatgattta
gtatacgaaccacctccggagtcacatccaagtgcttcttcatcttatccaatcgaagtt
gtagtagatccagtgactgtcaaaccacaacatgttcagagttcatcccaaaggactggc
caaatttctcagaattcaaaagaatcaggtccattgctacctatattctcttctaaacaa
cccacattgtcttgtacaccacttcaatctccatccaaaccatctccatcttcctcaaac
atacccgaatcttcattgataagcagctcagttacagtcaagccacaacatgttcagagt
tcttcccaaagcgtagctaatgaagtttctcacagttctaaaatttcaaatccaggccca
cctacaatttcttctagaccacttcaatctccatctaaaccatctccatcttcctctaac
ataccccaatcttcattgacaagcagctcagtgacagtcaagccacaacatgttcagagt
tctttccaaagcataactaatgaagtttctcacagttctaaagtttcaagtccagtccca
cctacaatttcttctacaccacttcaatctccatctaaaccatctgcatcatccaataac
ctttggctttaccatctatctcaattgccacctacattttcttccaacagttcaaatcca
ttgccacctacattttcctctagacaacctgcagattcctcaaacctatcccaatcttca
tcaaaaccacctcccttgtcttctagtccatctccatcatcccttaaaactccagttgat
tcttccatatcatatgcatatttccccaagaccactgaacccccatcagcttcttcttct
ccaacttcctataaaccacctcaatcttcaccttcagcggtcccatattcatccaagcca
cctccttcttcctctgggccacctctgtattccactaagcaaacaccagtttttaagcta
attctgcatacagctcccaataatgtaacaaatgaagaaagcaagacaacttatgtgtgt
gaaaagggtgcacccatatatgctattcctgaggatatcaaagatctaatcaaggaagac
attgcacctccagttctgaagcagtctttatctccttcaacttataaggcttattttgct
gctctgttatatgctgaggattactacttggagaaatggagtgagttcctaatgaagaaa
gtgacattgaagttggaggaagcagcacttcataaaaaatcaaagaaatcaaaacattct
aaaggaagtggtgaggaggaggataaaatctttgtagaatttgagattgattctattcct
gggaggcggcctttccttttatcaagggacgtggtccgtgcacgaccttcggataaaaag
gttgagccatttcagggttttatccatcgtgtggtgaaaagcaggcgtgtattagttgaa
tttggagatgattttcattcacagcatcatccaaatcgcaaatatgacatcagcttctca
tttaacagagtttgtctaaaaagggctcatcaagcaattcaagctgcattagatccttca
tcacacaacttcctttttcctgaatgcgtccctcggaagaatattcttaacccaccagct
ctgcttgaaacctatgatggacttaatacaaatgaattcgatgcagtgcgtcggatccta
agctttcagggctcaccaccttatcttcttgggggcccgcttattggcactgatgcgcaa
aggtatttacctgaagaaaaagtatcaacaagaacaggagtggttgtttgtaaggcagta
attgaaatttataaaacctctaaagagaacagaattcttatatgtgcacctataaaccgc
acatgtgatatgctaatgagaagtttgagggaggtgattcgagagtcagatatgtttcgg
gccaatgctgcatttcgagagatagatggggtacccattgacattctgcgctcatgtcct
ataaaagatgaatgttttgcatgtcctccactccaaaaacttcagaaattcaggataatt
ctgtcaacttttgtgagtagctttcgactacacaatcaaggtatagctgccggacatttt
agtcatatttttctagtggatgcctcatcaaccacagagccggaagcaacaatagctttg
gccaattttgctaatgagaatacatctgttattgttactggtaaacctggaaactgttca
cgttgggtccgctctgacatggcaaggaaatatggattgaggaagtcatattttgagaga
ctttgtgaagtcgggccatatcaaatcctcaatccaatgttcatcacagagctggttggc
tttgagcaatag
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