Quillaja saponaria (soapbark tree): O6P43_021491
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Entry
O6P43_021491 CDS
T09778
Name
(GenBank) Pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_021491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_021491
Spliceosome [BR:
qsa03041
]
Complex C
Other components
Step II factors
O6P43_021491
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Motif
Other DBs
NCBI-ProteinID:
KAJ7954793
LinkDB
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Position
9
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AA seq
593 aa
AA seq
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MDLLQSYSDRNDNHLDEPENQGEIPNSEANSSPDASPPRLLPAKSAAPKVDDTMLALTVA
QAHQTLTKPIDPVQHAVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDAAIE
PFVFDEQYNTFYKYGYAADPSASAGYNYVGDLEALQKNDGVSVYNIPQHEQKRRKLEKKK
ELEEDEVAGGDVDKVEIENPATDTWLLKNKKSPWSGKKEGLETELTDEQKKYAEEYAKKK
GEERSGFGGDKGEVVQDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSG
HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIWFCNDGTK
FLTAGYDKNIKYWDTETGQVISTFSTGKVPYVVRLNPDEDKQNVLLAGMSDKKIVQWDMN
TGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS
ISLHPNTNWLAAQSLDNQILIYSTREKFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSG
DGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccagtcgtacagtgaccgaaacgacaaccatttggatgaaccagaaaac
cagggtgaaatccctaattcagaagcaaattcgtcaccggacgcatccccacctcgcctc
ctccctgccaaatccgctgctcccaaggtcgatgacaccatgctcgcacttacagtagct
caagcgcaccaaaccctgactaaacccatcgaccctgtccagcacgccgttgccttcaat
cccacttacgaccagctttgggctcctatctatggtccttcccacccttacgccaaggac
ggcatagcccaagggatgcgcaatcacaagttgggttttgttgaggatgccgctattgag
ccctttgtcttcgacgagcagtacaacactttttacaagtatggctacgctgctgacccc
tcggcttctgctgggtacaactatgttggcgatttggaagctttgcaaaagaatgatggg
gtttctgtgtacaacataccgcaacacgaacagaagaggaggaagttagagaagaagaaa
gaattggaggaagatgaagttgcgggtggagatgttgataaggtagagattgaaaatccg
gcgactgatacatggttgctgaagaacaagaagagtccgtggtcaggtaagaaagaaggg
ctggagacagaattgacagatgagcaaaagaagtatgctgaagaatatgctaagaagaag
ggagaagaaagaagtggctttggtggtgacaagggagaggttgtccaggataagagtact
tttcatggaaaggaagaaagggactatcagggtaggtcttggattgcacccccgaaggac
gcgaaggccaccaatgatcactgttatatacccaagaggttggttcatacctggagtggg
cacacgaagggtgtatctgcaattcggtttttcccaaagtacgggcatttgattctttct
gctggaatggatacaaaagtgaagatttgggatgtgttcaattcaggtaaatgtatgaga
acttacatgggccactcaaaggctgtacgtgatatttggttttgtaatgacgggactaag
tttttgactgctggttatgataagaatattaagtattgggatactgaaactggtcaagtg
atatcaactttctcaaccgggaaggtcccatacgtggttaggcttaatccggacgaggat
aagcagaacgttttattggcgggcatgagtgataaaaagattgttcaatgggacatgaat
acagggcagataacgcaagagtatgatcaacatttgggggctgtcaataccatcacattt
gttgataacaacaggagatttgttacttcaagtgatgacaagtctctccgtgtatgggaa
tttggtattcctgtggttataaagtatattagtgagccccacatgcactccatgccatct
atttctcttcatccaaatacaaattggcttgctgcacagagtttggacaatcagatactt
atctacagcacgagggagaagtttcagctcaataagaaaaagagatttgctgggcacatt
gcggctgggtatgcttgccaggtcaacttctcaccggatggacgatttgtcatgtctgga
gatggagaagggaagtgttggttctgggactggaagagttgcaaagtttttagaactctc
aagtgtcatgaaggcgtctgcattgggtgtgagtggcatcccttggaacagagtaaggta
gcaacatgtgggtgggatggcttgatcaaatactgggactag
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