Quillaja saponaria (soapbark tree): O6P43_031581
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Entry
O6P43_031581 CDS
T09778
Name
(GenBank) Wd40 repeat protein-u4/u6 small nuclear ribonucleoprotein prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_031581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_031581
Spliceosome [BR:
qsa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
O6P43_031581
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
PRP4
NBCH_WD40
eIF2A
Nbas_N
WD40_like
Motif
Other DBs
NCBI-ProteinID:
KAJ7946686
LinkDB
All DBs
Position
13
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AA seq
571 aa
AA seq
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MEAEEENTTSNSLGESNGESLVSAVHATPSQPVQSLVPAVVTPPVVPPIAPIPILQPPPV
VLPLAPIPVGPPVFRPPVLQNGDIRMSDSDSDHDDAVPTRTNQGTGEYEISEESKQVRER
QEKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMAKLDA
EGQLEKLMKAHEEEEAAGYAAREDAEEEILQYPFYTEGSKSVLDARIDIAKYSISRAALR
LQRARRKRDNPDEDMDAEMDWSLKQAGSLALDFSEFGDDRALFGCSFSPDGERLATCSLS
GAAKLWSMPQVKKVSTLKGHMVHATDVAYSPVHNLIATASVDKTAKLWNDEGSLLKTFEG
HLDRLARIAFHPSGKYLGTASFDKTWRLWDIDTGEELLLQEGHSRKIYGIAFNHDGSLAA
SCGMDALTRVWDLRTGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS
LYTIPAHSKLISQVKFEPQEGYFLVTASYDMTAKVWSARDFKPIMTLSGHEGKVSSVDVV
GDGRYIATVSHDRTIKLWSSRINNEQAMDVD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgaagaggaaaacactacatcaaattctcttggagaatccaatggtgaaagt
ctggtttctgcagttcatgctactccatctcaaccagtacaaagtttagtcccagcggtg
gttacgccccctgttgtacctcctatagctcctattccaatccttcagcctcccccggtt
gttctcccactggcgcctattcctgtcggaccacctgtttttaggccacctgtgctgcaa
aatggtgacataagaatgagtgactcagattcagaccatgatgacgcagtccccaccagg
actaaccaaggcactggggaatatgagatatctgaagagagcaagcaggttagagaacgg
caggaaaaagcaatgcaggaactcatgatgaagaggcgtgctgctgcacttgcggttcct
accaatgacatggctgttcgggctcgtcttcgtcgacttggcgagcccataaccctattt
ggtgaaagggaaatggaaagaagggacaggttgcggatgattatggcaaagctggatgct
gaaggtcagttggaaaagctgatgaaagctcatgaggaggaagaagctgcaggttatgct
gcaagagaggatgctgaggaagaaatacttcaataccccttttacactgaagggtcaaaa
tctgtcttggatgccagaattgatattgcaaagtactctatttccagggcagctttgcgt
cttcaacgtgcaaggaggaaaagggataatccagatgaagatatggatgctgagatggat
tggtctctgaagcaggctgggagtttggcactggatttcagtgaatttggagatgatcga
gctctttttggttgttccttctcaccagatggagaaaggcttgctacctgttctttaagc
ggagctgctaaattatggagcatgcctcaagttaaaaaggtttctaccttaaaggggcac
atggtgcatgctactgatgttgcttattctcctgtgcacaaccttatagcaactgcctct
gttgacaagactgcaaagttgtggaatgatgaaggatctctgttgaagacatttgaaggt
catcttgaccgtcttgcacgcattgccttccatccatcagggaagtacctgggcacagct
agctttgacaagacatggcgattatgggacatagatacaggggaggagttgcttcttcaa
gaaggtcatagtaggaaaatatatggaatagcatttaaccatgatggatcattagcagct
tcttgtggaatggatgcactaactcgtgtttgggatcttcgtactgggagaagtattctt
gccttagaaggccatgttaagccagttctgggtgtcagtttttcacctaatggttatcat
ttagcaacaggtggtgaggacaacacatgtcgcatttgggatttgaggaagaagaaatcc
ttgtacaccattccagcccactcaaaattgatatcacaagtgaaatttgaaccgcaagag
ggttactttttggtaactgcctcatatgacatgacagcaaaggtttggtcagctcgtgat
tttaagcccatcatgacgttatcaggccatgaagggaaggtttcgtctgtggacgttgta
ggagatggacgttatatcgccactgtctcccatgatcgcaccataaagctgtggtccagt
agaattaacaatgagcaagctatggatgttgactaa
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