Quercus suber (cork oak): 111993745
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Entry
111993745 CDS
T05868
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111993745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
111993745
Membrane trafficking [BR:
qsu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
111993745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
111993745
NCBI-ProteinID:
XP_023881343
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MAPIPSENGVEGDDEREEEDDDEEEEEEEEEEAGEEEEEEEEEPRLKYQRMGGSIPTLLA
SDTASCIAVAERMIALGTHGGTVHILDFLGNQVKEFPAHTAAVNDLSFDIEGEYVGSCSD
DGSVVINSLFTDEKLKFEYHRPMKAIALDPDYSRKTSRRFVTGGLAGHLYYNTKKWFGYR
DQVLHSGEGPIHVVKWRTSLVAWANDAGVKVYDTANDQRITFIERPRGSPRPELLLPHLV
WQDDALLVIGWGTSVKIASIRTNQNRATNGTYMHVPMSSANKVDIVASFQTSYFISGVAP
FGDSLVVLAYILGEEDGEKEFSSTIPSRQGNAQRPEVRIVSWNNDELSTDALPVHGFEHY
KAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLQHGWHE
KALAAVEAGQGRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAH
LRQLPVLVPYMPTDNPRLRDTAYEVALVALATNSSFHKELLSTVKSWPHVIYSALPVISA
IEPQLNTSSMTDALKEALAELYVIDGQYEKAFSIYADLMKPEVFDFIEKHNLQDAIQEKV
VQLMTIDCKHAVPLLIQNKDVITPSDVVSQLLNSSNKCDNRYFLHLYLHSLFEVNPHSGK
DFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYETCIRRDLLREQVFILGRMGNSRQAL
AVIINKLGDIEEAVEFVTMQHDDDLWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMV
PNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARHGIYLSNEEE
EARAKRNDSSASQEIEKSSMRTTEVKSKTRGGGRCCMCFDPFSIQNVSVIAFFCCHAYHM
TCLMDSTSNVSGKKGSEATSREPLVEYEYDNGDVEDDEDDDEDTQSSSRRVRCILCTTAS
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggctccgattccctcagagaacggcgtcgaaggagacgatgagagagaagaagaagac
gacgacgaagaagaagaagaagaagaagaggaagaagctggagaagaggaagaggaggag
gaagaggagccgaggctcaagtaccagagaatgggagggagtatacctacgcttctcgcc
agcgatacggcgtcgtgtattgccgtcgcggagcgcatgatcgccctcgggacgcacggc
ggcaccgttcatatcctcgattttcttggcaaccaggttaaggagttccctgcccatact
gctgctgtcaatgaccttagctttgacatagaaggtgaatatgtaggaagctgttctgac
gatgggtctgttgtaataaacagccttttcactgatgagaaactgaagtttgagtatcat
cgtccaatgaaggctattgcgctggatccagattactcaagaaaaacgtcaaggagattt
gtaactggtggtttagcaggtcatttatattataatactaagaaatggtttggctatcgc
gaccaggtcttgcattctggtgaaggtccaattcatgtagtaaagtggcgaacaagtctc
gttgcttgggccaatgatgcaggtgtgaaagtttatgatactgccaatgatcagcgtata
acatttatcgaaagaccaagaggaagcccacgtcctgagcttttgcttcctcacttagtt
tggcaggatgatgctctcttggtcattggctggggaacttctgtaaaaattgcatcaata
agaacaaatcagaatagagcaactaatgggacatatatgcatgttccgatgtcaagtgcg
aacaaggtggatatagtggcatcttttcaaaccagctatttcatttcaggagttgctcct
tttggtgattctttggttgttctagcttatatcctgggggaagaagatggggagaaggaa
tttagtagcaccattccatcacggcagggaaatgcacagagaccagaagtacgtattgta
tcatggaataatgatgagctttcaactgatgccctacctgtacatggctttgagcattac
aaggcaaaagactattcccttgctcatgctccattctcaggtagcagctatgctggtggt
cagtgggctgcaggtgatgaaccactgtactatattgtgtccccaaaggatgtagttatt
gcaaaacctagggatgcagaagatcatattgcttggcttcttcaacatggctggcatgaa
aaagctttggcagcagttgaagctggtcagggacggagtgaactcctggacgaggtggga
tctagataccttgatcatttgattgtggaaaggaagtatgccgaagctgcatctttgtgt
cccaaattgctgcgaggatccgcttcagcatgggagagatgggttttccactttgctcat
cttcgtcagcttcctgtgctggttccatatatgccaacagataacccgagactgcgtgat
actgcttatgaggttgctcttgtagctttggctacaaattcttctttccataaggaactc
ttgtcaacggtcaaatcatggccacatgtgatttattctgcattgcctgttatttcggca
atagagcctcagcttaatacttcatccatgactgatgcgctcaaagaggcactagcggag
ttgtatgtaatagatgggcaatatgagaaagctttttctatctatgctgatctcatgaag
ccagaagtatttgacttcatagaaaaacataacttgcaagatgcaattcaagagaaggtt
gtgcaactgatgacgatagattgcaagcatgcagttccattattgatccaaaataaggat
gtgattactccatctgatgttgtttcacaacttctgaattccagcaataagtgtgataat
agatatttcctgcacctatatctccattcattatttgaagtgaatccacattctggaaag
gattttcatgatatgcaggtggagctttatgcagactatgatccaaagatgctacttcct
tttcttcgtagtagtcaacattatactcttgaaaaggcatatgaaacttgtatcagaaga
gatcttctaagggagcaagtcttcatccttggaagaatgggaaattcaaggcaagccctg
gctgtcattataaataaattaggcgatatagaggaggctgtagagtttgtgactatgcag
catgatgacgacctttgggaagaattaataaagcaatgtcttaacaaacctgagatggtg
ggcgttttgttggagcacacagttggaaatcttgatcctctttatattgtaaatatggtt
cccaatggcttggagatacctcggcttagggatcgtctggtcaagatcattactgactac
aggactgaaacttctcttcgacatggttgcaatgatatcctcaaggctgattgtgtcaac
cttttggttaaatactacaaagaggcaagacatgggatttacttgagcaatgaagaagaa
gaagcacgagcaaaacggaatgacagtagtgcttctcaggaaattgaaaaatcaagtatg
agaaccacagaggtcaagtccaaaactagggggggtggaaggtgttgcatgtgttttgat
cccttttctatacaaaatgtatcagtcatcgctttcttttgctgtcatgcttatcacatg
acttgtcttatggattcgacctctaatgttagtggcaagaaagggtctgaagccacttcc
cgggagcctttagtagaatatgagtatgataatggtgatgtggaggatgatgaggatgat
gatgaggatacccagtcaagttcgcgtcgtgtgcgttgtatcttatgcactacagcttcc
agttaa
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