Quercus suber (cork oak): 112001650
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Entry
112001650 CDS
T05868
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112001650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsu04121
]
112001650
03036 Chromosome and associated proteins [BR:
qsu03036
]
112001650
Enzymes [BR:
qsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112001650
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112001650
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112001650
Noncanonical PRC1 (PRC1.1)
112001650
Noncanonical PRC1 (PRC1.3/1.5)
112001650
Noncanonical PRC1 (PRC1.6)
112001650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-RING_4
zf-UDP
zf-rbx1
zf-Nse
zf-RING_6
zf-RING_11
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
112001650
NCBI-ProteinID:
XP_023889593
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MPAQKRCLSENLDDEEQHQHHAKQSRPHPQSLVDDEVIVDDDDDDDEAGQHLELQPQGQQ
VKEEDDEDEGGGGGEEEEDGDGDDDEAEDKQTVKQQQQQEKEKEENEEEEEEEDAEAEDS
QGSPSSTSQEKPEFVFVQLTDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMG
NNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEMTRNKQIQASIA
QILQRQSEALVKRRQLGNTPSTFTTRSQRNNRNTHSRRRNCRGIELQGSEDNEDENDNKD
SSSADERGTELRQRRRKRRAGTRSSQPSSSAANSDGGCVENDLEVSRENRGISPGLVWNP
EMLAWGRAGTRSHTRHGNASGCNNKSAQSTRLSRLVEYLRSLEEKNDELDIHLMLLSLDL
RSIPRLQQPHLCCRPSLSVKHLCEYIARQVPLQAEEIEILALKGQETLGFKANRLLEDAG
DPGHAPMLEDPCLHILEGQETLGGLKANCISKKNHLILAYRRKVTWSNP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacagaagcgttgtttgtcagaaaatctggacgatgaggagcaacatcagcat
catgccaagcaatcacgaccgcatcctcaatcactagtagacgatgaagttattgttgat
gacgatgacgatgatgatgaagcaggacaacatctagaactacaacctcaaggccaacaa
gtaaaagaagaagacgatgaagatgaaggaggaggaggaggagaagaagaagaagatggt
gatggtgatgatgatgaagcagaagataagcaaactgtgaaacaacagcagcaacaagag
aaagaaaaagaagaaaatgaagaagaagaagaagaagaagatgcagaagcagaggattct
cagggaagcccgtcttctacctcacaagaaaaacccgaatttgtctttgtgcaactgaca
gacattcgtaaagatgtgcagtgtcctatttgtctcgggattattaagaaaacacggact
gtaatggaatgccttcaccgcttttgcagggaatgcattgacaaatcaatgcgaatgggg
aataatgagtgtcctgcttgccgcacacattgcgccagtcggcgttctttgagagatgat
ccaaactacgatgccctaattgcagctttatatccagatattgataagtacgaggaggag
gaattggcatttcatgaagaggagatgacacgcaataagcagattcaagcatcaattgcc
caaattttacagcgacaatcagaagctctagttaagagacgccaactgggtaatacaccc
agcacatttacaactagatcacagcgcaacaatcggaatactcattcaaggcgacggaac
tgccgaggcattgaacttcaaggatctgaggacaatgaggatgaaaatgataataaggat
tcatcttctgctgatgaacgaggtacagaactcaggcagagaagacgcaagagacgggca
ggaaccaggtcctcccagccttcttcatcagcggccaattcagatggtgggtgtgttgaa
aatgatttagaagtcagcagagaaaacagaggaatatctcctggtcttgtttggaaccct
gaaatgcttgcttggggccgggctggtactcggagtcacacacggcatggcaatgctagt
ggttgcaacaataagagtgcccaaagcactcgcttgtccaggctggttgaatatctccgg
agcttagaggaaaaaaacgatgagttagatattcatctcatgcttctttctttggactta
agaagtataccaagattgcagcagccacacctttgctgccggccaagtttgtctgttaaa
cacctatgtgaatatattgctcgccaggtacctttgcaagctgaagaaattgaaattttg
gcgctaaaagggcaagaaactttgggttttaaagccaatcgccttttggaagatgcaggt
gatccaggtcatgctcccatgttggaagatccgtgtctgcacattttggaagggcaagaa
actttgggagggcttaaagccaattgcatttcgaagaagaatcatttgattctagcatac
aggcggaaggtgacttggtcaaacccataa
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integrated database retrieval system
