Quercus suber (cork oak): 112005972
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Entry
112005972 CDS
T05868
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112005972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112005972
03036 Chromosome and associated proteins [BR:
qsu03036
]
112005972
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112005972
Coactivators
SAGA/TFTC/STAGA complex
112005972
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112005972
STAGA complex
112005972
TFTC complex
112005972
SAGA complex
112005972
SLIK complex
112005972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
NBCH_WD40
ANAPC4_WD40
WD40_like
Cytochrom_D1
Nup160
PALB2_WD40
LisH
Motif
Other DBs
NCBI-GeneID:
112005972
NCBI-ProteinID:
XP_023894032
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MEEDQLEKFVVAYLKKKGFKQAEHAFQEELQQHQSKNNSSSSISTNSITDPDFAKHLLSF
SELENVPARYQDGYSKLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVVKGHIQEARTFF
NSFREDHEMMHSRDLQKLEGVLSPSHLEEMEFAHSLRHSKVKIKICQYSYELLLQYLHKT
QLTIMLGIINEHINFQVSPGQPNSISDDAEVVTLIGSSQDEATQINQKEIQWGLLEDSLE
ERLEKSGLLLSDSEKAEGETKEGELDENKKRSIEGGKQGTSTKKLKKDKAASATGKTGRL
EANAVITAPRVKPELALPVISTEVEKSILEDLRNRVQLSSVSLPSVNFYTFINTHNGLNC
SSISHDGSLVAGGFSDSSLKVWDMAKLGQEAVGSVLQGENDTTSSEHVLGPNGGKRSYTL
FQGHSGPVYSATFSPLGDFLLSSSADSTVRLWSTTMNANLVCYKGHNYPVWDVQFSPLGH
YFASASHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQS
GECVRIFIGHRSMVLSLAMSSDGRYMASGDEDGAIMMWDLSSGRCVTPLMGHTSCVWSLA
FSCEGSLLASGSADCTVKLWDVTASTKVPRTEENKSGNTNRLRSLRTLPTKSSPVYALRF
SRRNLLFAAGVLSKSV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatcaattagagaaattcgtggtagcgtatttgaagaagaaagggtttaag
caagctgagcacgctttccaagaagaacttcaacaacatcagagcaagaacaattcttca
tcctccatctccaccaactccatcactgaccctgacttcgccaagcacctcctctcattc
tccgaattggagaatgttccagcacgatatcaggatggatatagcaagctaaggtcttgg
acttatagttcactagatttatacaagcatgagttgcttcgtgtgctttatcctgtattt
attcattgtttcatggatctggttgtgaaagggcatattcaagaagctcgaacctttttc
aatagcttccgtgaagaccatgaaatgatgcactcacgagaccttcaaaagttggaagga
gttctttctccctctcatctggaggagatggaatttgctcattctcttaggcacagcaaa
gtcaaaataaagatatgtcagtactcctatgagcttctgctgcagtatctacacaagaca
caattgaccataatgcttgggattataaatgagcatattaactttcaagtttctccggga
cagcccaattcaatctctgatgatgccgaagttgttacacttattggaagcagccaggat
gaggccactcagataaatcagaaggaaatacaatgggggctgcttgaagattctttagaa
gaacgcttggaaaagagtgggcttttgctttcagattcggaaaaggctgaaggagaaacg
aaagagggggaattggatgagaataagaaaagatcaatcgaaggaggaaagcaaggcacg
tcaacaaaaaagttgaagaaagacaaggctgcaagtgcaacagggaaaactgggcgtctt
gaggccaatgccgtaattacggcaccacgagttaaaccagagcttgctttgccagtaatt
tcaacagaggtagaaaagtctattcttgaggacctaagaaaccgtgtacagttgagtagt
gtttcactgccatctgtcaacttctatacatttatcaacacacataatggcttaaactgt
tcatcaatatcccatgatggttctttggttgctggtggattttcagactcatcattgaag
gtttgggacatggcaaagcttggacaagaagctgttggttctgttttgcagggtgaaaat
gatactacttcaagtgaacatgttttagggccaaatggcgggaaaagatcttatacatta
tttcagggtcattcgggcccagtttattctgccacttttagtcctcttggggacttttta
ctttcctcttcagcagactcaacagttcggttatggagcactacaatgaatgcaaatctt
gtctgctataaaggccataattatcctgtatgggatgttcagtttagtcctctaggacat
tattttgccagcgcttcacatgatcgaacagcaaggatttggtcgatggacagaatacag
cctttaagaataatggcagggcacttatctgatgtcgattgtgttcaatggcatgtcaac
tgcaactacattgccactggctctagtgataaaacagtccgattgtgggatgtacaaagt
ggggagtgtgtccgaatatttattggtcacaggagtatggttttgtctttggcaatgtct
tctgatggtcggtatatggcctctggtgatgaagatggagcaatcatgatgtgggacctc
tcaagtggtcgctgtgtcacacctttaatgggccacacctcatgtgtatggtcgcttgct
ttcagttgtgaaggctcacttcttgcatctggatctgctgattgcactgtaaaattatgg
gatgtaactgctagtacgaaggtgccaagaactgaagaaaacaaaagtggaaatacaaac
agactaagatcattgagaacgcttccaaccaagtctagccctgtctatgcattgcggttt
tctcgaagaaatcttctttttgcggctggagtcctttctaaaagtgtataa
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