KEGG   Quercus suber (cork oak): 112016437
Entry
112016437         CDS       T05868                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5 isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
qsu  Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsu03041]
    112016437
Spliceosome [BR:qsu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112016437
 Complex B
    112016437
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4
Other DBs
NCBI-GeneID: 112016437
NCBI-ProteinID: XP_023904772
LinkDB
Position
Unknown
AA seq 900 aa
MAEPLAGKEDEEEERDMMEEVEEETEGMSERLRRKEKRKAKKKMKRKQMRKEMAEKEREE
EEARLNDPEEQRKLRMMEEEEKERMERDRKEFEEREKAWIEAMERKKKEEEEEEEEERRK
KALEEDSRRQQQAENENELIEDDDWEYVEGPAEIIWKGNEIIVKKKRVKVPKKDAHQQRI
DNADRPTSNPLPPQSEAFADYKNAPKLSAEQIIENVTQQVPNFGTEQDKAHCPFHLKTGA
CRFGQRCSRVHFYPDKSCTLLIRNMYNGPGLAWEQDEGLEVCKRCLHVILYWSSLLVMAI
TLRGLKMQATILVCGYIWHFLVLKMKRRKSHTDEEVEGCYEEFYEDVHTEFLKFGEIVNF
KVCRNGAFHLRGNVYVQYKSLDSAVLVYNSINGRYFAGKQISCEFVNVTRWKVAICGEYM
KSRFKTCSHGTACNFIHCFRNPGGDYEWADFDKPPPRYWVRKMASLFGYSDEVGYQKEVE
QENLGQLRHSRKRLTDVDSSSNFHGRYYSRSKSKEIDYLNGGGSSRRNDNKNDMQKSTQR
RGRTSNDRKQMEVLDEDMRGEKTNFKGGSYRKSRSHDTDSEGEWSDRYKDRYYGSARKSS
RLRNRDVNHRTHEVESEGGYSDRSEDRETHDGHARKSSRHSRNAKFVDDCEDQEKFGGNW
SDRDGDQETHDAYMTKSSRHRRKVGHPDDRMDSKNRTHDTDGEWSDGERDRDRHHRKRSE
SSRHLRKVGHSDDHKDSKNRSHDPEGEWSDRDTNRDRHHHKKRKSSRRDHDHGGSKNRAD
DTNLISDWLDSDGERHKSQTRKHTRHRNEALDYSDDEGEPAKKLKDKFHSRESSIEKSGL
ERGSMHSHSRWDSINENLESDGSRESNSSDQYVQRHKLHDLESSYNSDKYIDKQDRWEPD
NT seq 2703 nt   +upstreamnt  +downstreamnt
atggcagagccattagcaggcaaagaagacgaagaagaagagcgtgatatgatggaggaa
gtcgaagaagagacggagggtatgtcggagagattgaggaggaaggagaagaggaaggcg
aagaagaagatgaagaggaagcagatgaggaaggaaatggcggagaaggagcgagaggaa
gaggaagcgaggctgaacgatccggaggagcagaggaagttgaggatgatggaggaggag
gagaaggagaggatggagagggataggaaggagttcgaggagcgagagaaggcgtggatc
gaagccatggagaggaagaagaaggaggaggaagaggaagaagaggaggaacgaagaaag
aaggctcttgaagaagattcgagaagacaacaacaggctgaaaatgaaaatgagctcatc
gaggatgacgattgggaatatgtagaagggcctgctgagattatctggaaaggaaacgag
atcattgtcaagaagaaaagggtcaaggttccaaagaaggacgcccaccaacaaagaata
gataatgctgataggcctacgtcaaaccctcttcctccacagtctgaagcatttgctgat
tataagaatgcacccaaattatcagcagaacagatcattgaaaatgttactcaacaagtt
ccaaattttggaactgaacaggataaagctcattgtcctttccatttaaaaactggagct
tgtcgttttggtcagcgttgcagcagagttcatttttaccctgataaatcatgcacactg
cttatcaggaacatgtacaatggtcctggccttgcttgggagcaagacgaggggcttgag
gtctgtaaacgctgccttcatgtgattctttattggagctctctgctggtaatggccatt
accttgcgaggtttgaaaatgcaggcaacaatacttgtatgtggatacatttggcatttt
cttgtgttaaagatgaaaagaaggaagagccacacagatgaagaggttgaaggttgttat
gaagaattttatgaggatgtgcatacagagtttttgaagtttggggaaattgtaaatttt
aaggtgtgcagaaatggtgcattccacttgcggggaaatgtctatgtacaatataagtca
ctggattcagctgttcttgtttataattctattaatggtcggtactttgctggcaaacag
ataagttgcgaatttgtcaatgtgaccagatggaaagttgccatttgtggggagtatatg
aagtcaaggttcaagacatgttctcatggtactgcatgcaattttatccactgtttccgc
aatcctggtggagactatgaatgggctgattttgataaaccacccccaagatattgggtg
agaaagatggcttctttatttggttattctgatgaagtggggtaccagaaagaggtggag
caagaaaatttggggcagctgaggcactctagaaagaggttaactgatgtagacagttcc
tcaaatttccatggcaggtattactcaagatctaaatccaaagagattgactacttgaat
ggtggtggttctagtagaagaaatgacaacaaaaatgatatgcaaaagagcacacaacgg
agggggcgcacaagtaacgacagaaagcaaatggaagttctggatgaggatatgcgtgga
gagaaaacgaactttaaaggcggttcttataggaagagtagaagtcatgatactgattct
gagggtgaatggtctgacaggtacaaagataggtactatggtagtgcaaggaaaagctca
agactccggaacagagatgtcaatcatagaacacatgaagttgagtctgaggggggctat
tcagataggagtgaagatagagaaactcacgatggtcatgctaggaaaagctcaagacac
agcagaaatgctaaatttgtggatgattgtgaagaccaagaaaaatttggtggcaattgg
tcagatagagatggagaccaggaaacacatgatgcttacatgaccaaaagttcaagacac
aggagaaaagtgggacatccagatgatcgtatggacagcaagaacagaactcatgatact
gatggagagtggtcagatggggagagagacagagacaggcaccatagaaaaaggagtgaa
agctcaagacacctgaggaaagtgggacattcagatgatcataaggacagcaagaacaga
agtcatgatcctgaaggagagtggtcagatagggacaccaatcgagatagacaccatcat
aaaaagaggaaaagctcaagacgtgaccacgatcatgggggtagcaaaaacagggctgat
gatactaatcttatctctgattggttggacagtgatggagaaagacacaagagtcaaact
aggaaacatacaagacacaggaatgaagcattggattactcagatgatgaaggggaacca
gcaaaaaaattgaaagataaatttcacagtagggaatccagcatagaaaaatctggtctg
gaaagaggctccatgcatagtcactcaagatgggatagcataaacgagaatttggaatca
gatggaagtcgtgagtccaacagttcagatcagtatgtccagagacacaaattacatgac
cttgagtcaagctacaactctgataaatatatcgacaagcaggaccgttgggaacctgat
taa

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