Quercus suber (cork oak): 112028045
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Entry
112028045 CDS
T05868
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsu03036
]
112028045
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112028045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
112028045
NCBI-ProteinID:
XP_023916464
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEDEGGERSSIVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
VIIVTPNKLAPDGMVGVSELVDRFYATVKKVVMGRGCFDDTKGAVLIKNLAAKEPSALGL
DTYYKQYYLCLAATAATIKWTEAEKGVIVTNHSLLVTFNGSFDHMNIDATSVQNLEIIEP
LHSTLWGTSNKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTNGVLGIDYARRSQMLISSIILLKTALDAL
PLLSKALKDAKSFLLENVYKSICENEKYASIRKRIGEVIDEDVLHARVPFVARTQQCFAV
KAGIDGILDIARRSFCDTSEAIHNLATKYREDFKLPNLKLPFNSRQGFYFSIPQKDIQGK
LPSKFIQVLKHGNNIHCSTLELASLNVRNKSAAAECYIRTEVCLEALLDTIREDVSVLTL
LAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDNGPMAIDAGRHPILESIHNDFIPNNI
FLSEASNMVIVMGPNMSGKSTYLQQVCLTVILAQIGCYVPARFSTFRVVDRIFTRMGTVD
NLESNSSTFMTEMRETAFVIQNVSTRSLIVMDELGRATSSSDGFAIAWSCCEYLLSLKAY
TIFATHMENLSELATIYPNVKILHFHVDIRNNRLDFKFELKDGPRYVPHYGLLLAEVAGL
PSSVIETARSITSRITEKEVKRMEVNYLQYHPIQMAYRVAQRLICLKYSSQDEDSIQQAL
QDLKEQYIDGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagggaggagagagatcgagcatcgtgattggtctcatcgagaacagagct
aaagaggttggagttgctgctttcgacttaaggtcagcttcactgcatctttctcaatat
attgagactagcagttcatatcagaatacaaaaactttgctgcatttctatgatcccatg
gtgatcattgttaccccgaacaagctggcaccagatggtatggttggagtttcagagttg
gtggatagattttatgctacagtaaaaaaggttgtaatgggccgtggttgcttcgatgat
actaagggtgctgtgctgattaaaaatctagcagccaaggagccttctgcactcggtttg
gatacttattacaagcagtattatctatgcttggctgccactgcagctactattaaatgg
acagaagcagaaaaaggggtcattgttacaaaccactcattgttggttacgtttaatgga
tcatttgaccacatgaatattgatgctaccagtgtacaaaatttagaaattattgagcca
cttcattcaaccctttggggcacaagcaacaaaaaaagaagtctgttccatatgcttaag
acaacaaaaactattggagggactagacttcttcgtgccaatcttttgcagcctttgaaa
gatattgaaaccatcaatgctcgccttgattgcctggatgagctgatgagcaatgaacag
ctgttttttggactctctcaggttctgcgtaaatttccaaaagagacagatagagtactg
tgtcatttctgctttaagccaaagaaagtcacaaatggcgtcttgggtattgattacgct
aggagaagccaaatgttaatctcaagcattattctccttaaaacagcattggatgcactg
cctttactctcaaaggcacttaaggatgcaaaaagttttcttcttgaaaacgtatacaaa
tctatatgtgaaaatgagaaatatgcgtccattagaaaaaggatcggagaggtgattgat
gaagatgttcttcatgcacgggttccttttgttgcccgcacacagcagtgttttgctgtc
aaggcaggcattgatggaattttagatatagcaaggaggtcattttgtgatactagtgaa
gcaatacataatcttgcgaccaagtatcgcgaagatttcaaattgcccaatctgaaactc
ccatttaacagtaggcaaggtttttactttagcataccacagaaggatattcaaggaaag
cttcctagcaagttcattcaggtcttgaaacatggaaacaacatacattgctcaactctg
gaacttgcttctctgaatgttagaaataagtctgcagctgcagagtgttatatacgaaca
gaagtttgcctggaagcacttttagataccatacgggaggatgtttctgtgctcactctc
cttgcggaggtcttatgtcttctagacatgattgtcaattcatttgctcatacaatatcg
actaagcctgttgatcgatatactagacctgaatttacggataatggtccaatggcaatt
gatgctggaagacaccctatcttggaaagcatacacaatgacttcattcccaacaacatc
tttctctcagaagcatcaaatatggtgattgtcatgggcccaaacatgagtggaaagagc
acttatctccaacaagtttgtctcacagttattcttgctcagattggttgctatgttcct
gctcgcttctcaacttttagggtagtcgatcgtatattcacaaggatgggtaccgtggat
aatcttgaatcaaactctagtacgttcatgacagagatgagagagacagcttttgtaatt
cagaatgtctccacaaggagtctgattgttatggatgaacttgggagggctacttcttcc
tctgatggatttgcgattgcatggagctgctgcgagtatctgttatcattgaaagcgtat
accatatttgctactcatatggagaacctatcagaattagcaaccatctatccaaatgtg
aagattcttcactttcatgttgacataagaaacaaccgtttagatttcaagtttgaactc
aaggacggtccaagatatgtaccacattatggtctattattagcagaagtggcaggttta
ccaagctcagtgattgaaacagccagaagcataacatccaggatcacggaaaaggaagtg
aagaggatggaagtaaactacctgcagtatcatccaatccagatggcctaccgtgttgct
caacggcttatatgtttgaagtactccagccaagatgaggattctattcagcaagcattg
caggatctaaaagagcagtatattgacggaaggctctag
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