Rahnella aquatilis HX2: Q7S_23946
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Entry
Q7S_23946 CDS
T01850
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00470
D-Amino acid metabolism
raa00552
Teichoic acid biosynthesis
raa01100
Metabolic pathways
raa01503
Cationic antimicrobial peptide (CAMP) resistance
raa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q7S_23946
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
Q7S_23946
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q7S_23946
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Q7S_23946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
raa01504
]
Q7S_23946
Enzymes [BR:
raa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
Q7S_23946
Antimicrobial resistance genes [BR:
raa01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
Q7S_23946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
DUF446
Motif
Other DBs
NCBI-ProteinID:
AFE60943
LinkDB
All DBs
Position
PRA1:241493..243046
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AA seq
517 aa
AA seq
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MEQWAEVIAIFMRFRHRPELAWCHDTHRRDYATLSQRAMDLAVQIRQHQTDTDRHVKPVL
VYGHKSFDFIAAWWACLLCGCPVVPVESDNSPERVEKIALTLGAGLLLNTTATPVQVNAV
RVLNTAEINGPVCTDATLHTLLSESRQRLQDVPGEPLAYIMFSSGTTGEPKGIQITLRNM
VNFIHWIREDFPLDGAVTGNVRYCFDVSLFEIWLAWVFLQPLSVLDHRELISTRKMIAQH
AETGVVCWVSTPSIIRLYLLDPTFSASQLPLLRRFIFCGETLTKDIVTQLWTRFPDASVI
NTYGPTECTVAVTSVLITPEMISDPLPLPIGAARPGAVLSLHGQESDSGRGELLISGPCV
GPGYLNAPLKQQTQFIRHAGQNAYLTGDIGQAKGDCYYFLGREDGEVKIQGHRIDLYEIE
HFLRSQNLVSDVVAVPFLRKGNAEAIQACVILNDSCALSALGHAMQAHFPPWSIPRYWYA
IPHTILNHNGKLDRSAARDLALDKGEKYVFIANQTAV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatgggcagaggttatcgcgattttcatgcgtttccggcaccggcccgaactt
gcctggtgccatgatacacaccgtcgcgattatgccacgctgagtcagcgcgcaatggat
ctcgccgtgcagatccgccagcatcagacagacactgaccgccatgtaaaaccggtgctg
gtctacgggcataagtcgttcgattttattgccgcctggtgggcatgcctgctctgtggc
tgccctgtggtgcctgttgaatcggataacagcccggaacgcgtggagaaaattgcgctc
accctcggtgcaggtctgctgctgaatacgacggcgacgccggttcaggtgaacgcggtc
agggtactcaacacggcggaaattaacggacctgtctgtacggatgccacactgcatacg
ctgctgagtgaaagccgccagcgtttgcaggatgtccccggcgaaccgctggcttacatc
atgttttcctccggcaccaccggcgaaccgaaagggatccaaatcaccctgcgcaatatg
gtgaatttcattcactggatccgcgaagattttccactggacggtgccgtcaccggcaat
gttcgctactgctttgatgtttccttatttgaaatctggttagcctgggttttcctgcaa
ccgctgtcggtgctcgatcaccgcgaactcatcagcacccgcaaaatgattgcacagcat
gcagaaaccggtgttgtctgctgggtatccacgccttcgattatccgcctttatctgctg
gaccccacgttcagtgcctcacaacttcccctgctccggcggtttattttttgcggtgaa
acactgacaaaagacatcgtcacacagctatggacacgatttcccgatgccagcgtgata
aacacctatggcccgacggaatgcacggttgcggtgacctcggtgcttattacacctgaa
atgatcagcgacccgctacccttgccgattggcgcggccagaccgggcgcggtactcagc
ctgcacggacaggaaagtgacagcggccggggcgagctgttaatcagcggcccctgcgtc
gggccaggctacctcaatgcaccgctgaaacagcaaacacagtttatccgccatgccggg
caaaatgcctatctgaccggtgatatcggccaggcgaagggagattgttactattttctt
ggccgcgaggacggggaagtcaagatccagggacaccgcatcgatctctatgaaattgag
catttcctgcgtagccagaatctcgtgtcggatgtcgttgcagtgccttttctacgcaaa
ggcaatgccgaggctatccaggcctgcgtgatcctcaatgattcctgcgcgctttcagcg
ctgggccacgcgatgcaggcacatttcccgccgtggtcgatcccccgttactggtatgcc
attcctcatactattttgaatcataacggaaaacttgaccgcagcgcggcgcgtgatctg
gcactggataaaggggagaaatatgtttttatcgcaaatcagaccgctgtttga
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