Rhodoferax antarcticus: RA876_05540
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Entry
RA876_05540 CDS
T04655
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00730
Thiamine metabolism
rac00900
Terpenoid backbone biosynthesis
rac01100
Metabolic pathways
rac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RA876_05540
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RA876_05540
Enzymes [BR:
rac01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
RA876_05540
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Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
APW45920
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Position
1131964..1133835
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AA seq
623 aa
AA seq
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MTHTYPLLQTINSPDDLRRLNRSQLEPLSTELRAYLLDSVAKTGGHLSSNLGTVELTVAL
HYVLNTPYDRIVWDVGHQTYPHKILTGRRDRMHSLRQLGGLSGFPRRDESDFDTFGTAHS
STSISAALGMALASRLKGEDRHVTAVIGDGAMTAGMAFEALNNAGVADCNLLVILNDNDM
SISPPVGALNRHLAKLLSGQFYAAAKNASKTVLKGAPPLWELAKRFEESAKGMVKPITLF
EKFGFNYVGPIDGHDVDTLVSVLENIKQLKGPQFLHVVTKKGQGYKMAEVDPVAYHGAGK
FDPAVGLAKASAPAKITFTEVFGNWLCDMGAADNRLVAITPAMREGSGMVEFEKLFPQRF
FDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQMIHDVAIQNLPVVFALDRAGL
VGSDGATHAGAYDIAFIRCIPNMSLACPADENECRQLLSTAYAQETPVAVRYPRGAGAGV
AVSCALETLPFGKGEIRRTGKKVAILAFGTLLYPALQAAEKLDATVVNMRWAKPLDTELL
LQIAADHEMLVSVEEGCTLGGAGSAVLEALAQANLMRPVLQLGLPDKFIEHGDPAKLMTM
MGLDAAGIEAAIQARFGGLMTPV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacacacacgtatccactgttgcagaccatcaactcgccagacgatcttcggcggctc
aatcgctcccagctggagccgttgtccaccgagctgcgggcctatctgctcgacagtgtg
gccaaaaccggtgggcatttaagctccaacctgggcacggtggagctcaccgtggcgctg
cactatgtgctcaacacgccctatgaccgcatcgtttgggatgtgggccaccagacctat
ccgcacaaaattctgaccgggcggcgcgaccgcatgcacagcctgcgccagttgggcggt
ttgagcggctttccccggcgcgacgagagcgactttgacaccttcggtaccgcgcactcc
agcacctccatctcggcggcgctgggcatggccttggccagccgcctgaaaggcgaagac
cggcatgtcactgcagtgattggtgatggtgccatgacggccggcatggcttttgaagcc
ctgaacaacgccggtgtggccgactgcaacctgctggtgatcctcaacgacaacgacatg
tcgatcagcccgccggtgggcgcgctgaaccggcacctggccaagctgctcagcggccag
ttttacgcggcggccaaaaatgccagcaaaaccgtgctcaagggtgcaccgcccctgtgg
gagttggccaagcgttttgaagaatctgccaagggcatggtgaagccgatcaccttgttc
gagaaattcggctttaactacgtcggcccgattgacgggcacgatgtggacaccctggtg
agcgtgctggaaaacatcaagcagctcaaaggcccgcaatttctgcatgtggtcaccaaa
aaaggccagggctacaagatggcggaagtggacccggtggcctaccatggcgcgggaaag
tttgacccggcggtgggtctggctaaggccagtgcgccagccaagatcactttcaccgag
gtgtttggcaactggctgtgcgacatgggcgcggcggacaaccggctggtggccatcacc
ccggcgatgcgcgagggctcgggcatggtggagtttgaaaaactctttccacagcgcttt
tttgacgtcggcattgctgaacagcacgcggtcacctttgccgccgggctggcgtgtgag
gggctgaagccggtggtggcgatttactccacctttttgcagcgcgcctatgaccaaatg
atccatgacgtggccattcaaaacctgccggtggtgtttgcgctggaccgcgctggcctg
gtggggtctgacggcgccacccatgctggcgcgtatgacattgcgttcatccgctgcatt
ccgaatatgagcctggcctgtccagccgacgaaaacgaatgccgccaactgctcagtacc
gcctacgctcaggaaaccccggtggcggtgcgctacccgcgtggcgcgggtgcaggtgtt
gcggtgtcgtgcgcgttggaaacgctgccatttggcaagggcgagatccgccgcaccggc
aaaaaagtggctattttggcttttggcaccctgttgtacccagcgttgcaagcggctgaa
aagctcgatgccacggtggtcaatatgcgttgggcgaaaccgctcgatactgagctgtta
ttgcaaattgccgctgaccatgagatgctggtcagcgttgaagagggctgcaccctgggc
ggtgcgggcagtgcggtgctggaggcgctggcgcaggccaatttgatgcggcccgtgttg
caactgggtctgcccgacaagttcatcgaacatggtgatccggctaagttgatgaccatg
atggggctggacgctgcaggtattgaagctgcaattcaggcgcgttttgggggtttgatg
acccccgtttga
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