Rhodoferax antarcticus: RA876_11515
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Entry
RA876_11515 CDS
T04655
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rac
Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rac03009
]
RA876_11515 (rimO)
Enzymes [BR:
rac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RA876_11515 (rimO)
Ribosome biogenesis [BR:
rac03009
]
Prokaryotic type
ribosomal protein modification factors
RA876_11515 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
APW46883
LinkDB
All DBs
Position
complement(2384329..2385723)
Genome browser
AA seq
464 aa
AA seq
DB search
MNSVTSSGAQAPKVGFVSLGCAKALTDSELILTRLSAEGYQTVKTFQGADLVIVNTCGFI
DDAVKESLDTIGEALAENGKVIVTGCLGAQTGDAGGNLVRQMHPSVLAVTGPQATQEVMD
AVHAHLPKPHDPFMDLVPNAFGSAGIKLTPRHYAYIKISEGCNHRCTFCIIPSMRGDLVS
RPIGDVLKEAQALFEGGVKELLVISQDTSAYGVDVQYRTGFWNGKPIKTRLFELTQTLGE
MAQTYGAWVRLHYVYPYPSVDDILPLMASGLVLPYLDVPFQHSHPDVLKRMKRPASGEKN
LERIQRWREACPDIVIRSTFIAGFPGETEDEFAHLLNFMRAAKIDRAGCFAYSPVKGAAA
NDLPGMLPAAVREERRAAFMAVAEELSAAKLQQQVGATLQILVDQAPGLGKKGGLGRSYA
DAPEIDGVVRLLAPEKISKTLKVGEFTKARIVQAQGHDLVAQPF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtgacttcgagtggggcgcaagcgcccaaagttggtttcgtcagcctgggt
tgtgcgaaggcactgactgactccgagttgattctgacgcgactcagcgcagaggggtac
caaaccgtcaagacctttcaaggcgctgatctggtgatcgtcaacacctgtggcttcatt
gacgacgccgtcaaggaaagcctggacaccatcggcgaagcgttggctgaaaacggcaag
gtcatcgtgaccggctgcctgggtgcccagacaggtgatgcaggcggtaacctggtgcgc
cagatgcaccccagcgtgctggccgtgaccggcccgcaagccacccaggaagtgatggac
gccgtgcacgcgcacctgcccaagccacatgaccccttcatggacctagtacccaatgcg
tttggcagcgcgggcatcaaactgacacccaggcattacgcctacatcaagatcagcgaa
ggttgcaaccaccgctgcaccttttgcatcattccctccatgcggggcgatctggtgtca
aggccgattggcgatgtgctcaaagaagcgcaggcactgtttgaaggcggcgttaaagag
ttactggtaatcagccaagatacctcggcctatggggtggatgtgcagtaccgcaccggg
ttctggaatggcaagccgatcaagacacggctgtttgagctgacgcaaacgctgggcgag
atggcgcaaacttatggtgcctgggtgcgtttgcactatgtgtacccgtacccgagcgtg
gacgacatcctgccactgatggcttctggtctggtgttgccgtatctggacgtaccgttt
caacacagccacccggacgtgctcaaacgcatgaaacgccccgccagtggcgaaaaaaat
ctcgagcggatccagcgctggcgcgaggcctgccccgatatcgtcattcgcagcactttc
attgcgggttttccgggcgagacggaagacgagtttgcgcatctgctgaatttcatgcgg
gcagcaaaaattgaccgcgccggttgttttgcgtacagccctgtcaaaggcgctgctgcc
aacgatttgccaggcatgttgcccgcggcggtgcgtgaagagcgtcgtgccgcgttcatg
gcagttgccgaggaattgtccgccgccaaactccagcagcaagtgggtgccaccctgcag
attctggtggaccaggcgccgggcctcggtaaaaaaggtggcttgggccgctcttatgcg
gatgcgcctgagattgatggtgtggtgcgcttgttggcacccgagaaaatcagcaaaaca
ctcaaggtgggcgaattcaccaaggcgagaattgttcaggctcaaggccacgacctcgtt
gcccaaccgttttga
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