Rhodoferax antarcticus: RA876_12015
Help
Entry
RA876_12015 CDS
T04655
Name
(GenBank) bifunctional diguanylate cyclase/phosphodiesterase
Organism
rac
Rhodoferax antarcticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
PAS_4
GAF
PAS
PAS_9
PAS_3
PAS_8
T3SS_ExsE
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
APW46963
LinkDB
All DBs
Position
complement(2500896..2503472)
Genome browser
AA seq
858 aa
AA seq
DB search
MLAILDTLPDALFELDLDGRYLDYHSPRADLLAVPPETLLGKTVHEVMPAIPADACMAAL
QEANTLGFSTGRLIELRLPAGHRWFELSISRKSNGAGRSVSFIVLARNVTQRVASEHKLQ
RLTDLYAALSQCNQAILRCTSAAELFPIICADAVNYGGMKMAWIGTLNAATGLIVPVASS
GEGTAYLQDILITPHANQPSGQGPVGTAFREARPVWFQDFLHDPRAQAWRARASEFGWAS
VAGLPLTCHGAMYGVLSVYSGTVNAFDDSAQALLLEIAQDISFALARFADERERNRVQMA
LQDSEERYRRVFHTSPDSVNINRLSDGLYIDVNEGFERLSGWTADEVIGKTSQEINIWRC
PADRHRLKRALNRDGHCYNMEVEFCRKDGTVATALMSAALVRFDNVDCILSMTRDMSDIR
LAQERINQLAHFDQLTGLPNRSQLQERFEFVRQLAQRNGESLALMFLDLDHFKNVNDTLG
HTIGDRLLVQVSQRLAGVLSAGDTLSRMGGDEFILLLPSATEESASQMALKVLSVMAEPF
IIDDHELVSTLSIGIALYPHDGDDFETLSKNADIAMYRIKRSSHNNFCFFTPEMQSHSAR
RLQLSNALYFGLTRGEFLLHYQPQISLQDGHMVGVEALIRWQHPEFGAVAPSEFIPIAED
SGQILAIGEWVLRTAVTQMKAWLDAGMKPMVMSVNLSTVQFRHPDLLALVMQTLQMAGLP
AQYLELELTEAMAMDNPTAAIALMNQLHEQGVRLSIDDFGTGYSSLSYLKKFKVSKLKID
QSFVRDIGDDKDDRAIVTAVINLASSLGMQTIAEGVETPGQLAFLRLQGCDEAQGYYFSK
PLPVDQLEAFAKTMTAVP
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
ttgttggcgattttggacaccctgccagacgcattgtttgagcttgatctggatggccgc
taccttgactaccactcgccacgggctgacttgctggccgtgccgcctgagaccctgctg
ggcaaaacagtgcatgaggtcatgccagccatccctgccgacgcctgcatggccgcgctg
caagaggccaacaccttaggtttttcgactgggcggttgattgagctgaggttgccagcg
ggccaccgttggtttgagctgtcaatttcccgcaaaagcaacggtgcgggccgctcggtg
agttttattgtgctggcgcgcaatgtgacccaacgcgtggcttccgagcacaagctgcag
cgcctgaccgacctttatgccgccttgagccaatgcaaccaagctattctgcgctgcacc
agcgcggctgaactttttcccatcatctgtgctgacgcagtgaactacggcggcatgaaa
atggcctggattgggacgttgaatgcggccaccggcttgatcgtgccagtggcctcaagt
ggtgagggcacagcttacttgcaagatattttgatcacaccgcacgccaatcaacccagc
ggtcaggggccggtgggtaccgcatttcgtgaggcgcggccggtctggtttcaggatttt
ctgcatgaccctcgggcgcaagcctggcgcgcccgcgccagtgagtttggctgggccagc
gtggcgggcctgccgttgacctgccatggcgccatgtatggggtgctgtcggtttattcg
ggtaccgtcaatgcgtttgacgactcggcacaggccttgttgctggaaatagcgcaagac
atcagctttgcgctggcgcgctttgccgatgagcgggagcgcaaccgggtgcaaatggcc
ttgcaggacagtgaagagcgctaccgcagggtttttcataccagcccggacagcgtcaac
atcaaccgcctgagcgacggcctgtacattgacgtgaatgaagggtttgagcgcttgagc
ggctggacggcggacgaggtgattggcaaaacctcgcaggagatcaatatctggcggtgt
cctgcagatcgccatcggttgaagcgggctttgaaccgcgatggccactgctacaacatg
gaggtggagttttgtcgcaaggacggcactgtggcgaccgcgttaatgtccgccgccttg
gtgcgctttgacaatgtggactgcattctttcgatgacccgtgacatgagcgacatccgg
ctggcgcaagagcgcattaaccaactggcacattttgaccaactcaccggtttgcccaac
cgcagtcaattgcaagagcgttttgagtttgtgcggcagctggcgcagcgcaacggcgag
agtctggccttgatgtttcttgacctggaccatttcaagaacgttaacgatacgctgggg
cacaccattggcgaccgtctgctggtgcaggtgagccagcgactggcaggcgtgctgagt
gcgggcgacacactgtcacgcatggggggtgatgaattcatcctgctgctgccctcggca
accgaggaaagtgccagccagatggccttgaaggtgctgtccgtcatggccgagcccttc
atcattgatgaccatgagttggtcagcaccttgtcaatcggcattgcgctgtatccgcac
gatggcgacgatttcgagacgttgtccaaaaacgccgacatcgcgatgtaccgcatcaaa
cgctccagccacaacaatttttgctttttcacgcccgagatgcagtcccactcggcgcgc
aggctgcagctcagcaatgccttgtattttggcctgacgcgaggtgaatttctgctgcac
taccagccgcaaatctctctgcaggacggccatatggtgggcgttgaggccctgatacgc
tggcagcacccggaattcggggcggtagcgccgagcgaattcatcccgattgctgaggat
agcgggcagattcttgccattggcgaatgggtgttgcgcactgcggtgacgcagatgaaa
gcctggttggacgctggcatgaaaccgatggtgatgtcggtgaatctgtcaaccgtgcag
tttcgccatcccgatctgctggccttggtgatgcagacgctgcaaatggcgggcctgccg
gcccagtatctggagctggagctgacagaagccatggccatggacaacccgaccgccgcc
attgcactgatgaaccagttgcacgagcagggcgtgcgcctgtcgattgacgactttggc
accggttactcgtctttgagttacctgaagaaattcaaggtgtccaagctgaagatcgac
cagtcgtttgtgcgtgatattggcgacgacaaggacgaccgcgccatcgttaccgccgtc
atcaacctggccagcagcttgggaatgcaaacgattgccgaaggtgtcgagacacccggt
cagctggccttcttgcgtttgcaaggctgtgacgaggcgcagggctactacttcagcaag
ccgctgccggtggatcaacttgaggcctttgccaagacgatgacggcagtgccttga
DBGET
integrated database retrieval system
