Rhizobium acidisoli: CO657_13880
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Entry
CO657_13880 CDS
T06438
Name
(GenBank) DUF4130 domain-containing protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rad
Rhizobium acidisoli
Pathway
rad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CO657_13880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_13880
Enzymes [BR:
rad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CO657_13880
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CO657_13880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QAS80750
LinkDB
All DBs
Position
complement(2799768..2801219)
Genome browser
AA seq
483 aa
AA seq
DB search
MRRVVLAGRGDLAEWRDAARAFAAAGILPEEIDWRERSAEADLAFQRDAMPPAPVTRKPM
TVPPAFIELAETVLCHSDPARFSLLYRLLWRLQLDRQLLEVASDEDVVRARLMAKNVRRD
AHKMTAFVRFKEVGAAAAGRRKFIAWFEPDHHIVRRTAPFFQRRFTDMDWLIATPKGSAA
WDGARLTLSDAPCEKPNLTDATDDLWRTYYVSIFNPARLKLKAMQAEMPKKYWKNLPEAD
LIPGLIASAESQVRAMAAREATQSLPFHDRLQEAARNLPIEPEAPAGTLEALSAEAGACT
RCPLHAKATQTVFGEGPRDAEVMFVGEQPGDQEDIAGRPFVGPAGKLLDQVIADVGIDRS
ALYVTNAVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLELALVKPKLIVAMGATALAAL
TDVKERLQDVRGKAMAIEGGRTLFVTVHPSYLLRIPDERLKAEEMVRFRNDMLEIQRLMA
SAG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtcgtgcttgcgggacggggcgatcttgccgaatggcgcgatgccgcgcgc
gccttcgcggccgccggcattttgcctgaggagatcgactggcgggaaagaagcgcagag
gcggatcttgcctttcaacgcgacgccatgccgccggcgccggtgacacgcaagccgatg
acggtgccgcccgcctttatcgagcttgccgagacggttctctgccactccgacccggcg
cgcttctccttgctttaccgcctgctctggcggctgcagctggaccggcaactgctcgaa
gtggcctccgacgaggatgtcgtgcgggctcgcctgatggcaaaaaatgtccggcgcgac
gcccacaagatgacggctttcgtccgtttcaaagaggttggtgcggcagcggcgggccgt
cgaaaattcatcgcctggttcgagccggaccatcatatcgtcaggcgcacggcgccattt
ttccaacggcgcttcaccgatatggactggctgatcgccacgcccaaggggtcggcggcc
tgggacggtgcgcggctgacgctcagcgacgcgccctgcgagaagcccaatctcaccgat
gccaccgatgatctctggcgcacctactatgtcagcatcttcaacccggcgcggctgaag
ctgaaggcgatgcaggcggaaatgccgaaaaaatactggaagaacctgccggaagccgat
cttatccctgggctgatcgcatccgccgagagccaggtgcgggccatggccgcgcgcgag
gcgacgcaatcgcttccctttcacgaccggcttcaggaggccgcccgcaaccttcccata
gaacctgaagcgccggccggcacgcttgaagcgctaagcgccgaagctggcgcctgcacc
cgctgtccgcttcatgccaaggcgacacagaccgtcttcggggaggggccgcgcgatgcg
gaggtgatgttcgtcggcgagcagccgggcgatcaggaggatatcgccgggcgccccttc
gtcggcccggccggcaagctgctcgaccaggtgatcgcggacgtcggcatcgaccgttcg
gcgctctatgtcaccaatgccgtcaagcatttcaaatatgagccgcgcggcaaacgccgc
atccatcagaagcccaatatgggggaggtgaagcattgtcgctggtggctggatctggaa
ctggcgctcgttaagccgaagctgatcgttgccatgggggcgaccgcgcttgcggcgctg
accgatgtgaaagagcgcctgcaggacgtcaggggaaaggcaatggcgatcgaaggagga
cgcacgctcttcgtgacggtgcatccctcctatctgctgcgcattcccgacgagcggttg
aaagcggaggagatggtgcgatttcgcaacgatatgctggagattcagcggcttatggcg
tccgccggataa
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