Rickettsia africae: RAF_ORF0310
Help
Entry
RAF_ORF0310 CDS
T00979
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
raf
Rickettsia africae
Pathway
raf00470
D-Amino acid metabolism
raf00550
Peptidoglycan biosynthesis
raf01100
Metabolic pathways
raf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
raf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RAF_ORF0310 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RAF_ORF0310 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RAF_ORF0310 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
raf01011
]
RAF_ORF0310 (ddlB)
Enzymes [BR:
raf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RAF_ORF0310 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
raf01011
]
Precursor biosynthesis
Amino acid ligase
RAF_ORF0310 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ACP53256
UniProt:
C3PMU6
LinkDB
All DBs
Position
336879..337844
Genome browser
AA seq
321 aa
AA seq
DB search
MHKYQTHWVEHSIVKILSSTGKKHIALMVGGMSAEREVSLVSSEGVSKALIELGYRVTFI
DMGADIAVRLQEIKPDIVFNCLHGTYGEDGCLPGLLNIMRIPYTHSGMLSSALAFDKIHS
RIWFLTNNINMAESIVVNKSDNIKNDPMKRPYVIKPLTQGSSIGVEVIFAEDDFNFADYD
FPYGDQVIIEQYIKGRELQVAVLNGKALGALEIKLLKNRFYDYETKYTEGFADHLCPAPL
PANLYEKLLIESEKIYKTMNCKGPARAEFILEEQTNKLYALEINTHPGMTPLSIVPEIAA
YAGINFTNLIEEIIKMASFES
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcataaatatcaaacacattgggtagaacactctatagtcaaaatattaagtagtacc
ggtaaaaagcatatagcattaatggtaggcggtatgtctgctgagcgtgaagtatcgtta
gtgtcaagtgaaggagttagtaaagctttaattgaattaggatatagagttacctttatt
gatatgggagcggatattgcagttagattacaagaaataaaacctgatatcgtttttaat
tgcctgcacggtacatatggtgaagacggttgtttaccaggattacttaatataatgcgg
attccttatactcatagcggcatgttatcttcagctttagcattcgataaaatacattct
aggatctggtttttaacgaataatattaatatggcagaaagcattgttgtaaataaaagc
gataatataaaaaatgatcctatgaaacgaccgtacgttattaagcctcttacgcaaggt
tcaagtattggtgttgaggtgatatttgcagaagacgattttaactttgccgattatgat
tttccttacggtgatcaggtaataatagaacaatatataaaagggcgagaattgcaagta
gcggtattaaacggcaaagctcttggagctttagagattaaattactaaagaatcgtttc
tatgattatgaaactaaatataccgaaggatttgctgatcatctttgtcctgctccgcta
cctgctaatttatatgagaaattacttatagagtcagaaaaaatttataaaacaatgaat
tgtaaaggtcctgctagagcagagtttattttagaagagcagacaaacaagttatatgct
ttggagataaatactcacccaggtatgacgcctttatcaatagtgccggaaattgcagct
tatgcagggataaattttactaacttaattgaagaaattataaagatggcaagctttgaa
tcatga
DBGET
integrated database retrieval system
