Riemerella anatipestifer RA-CH-1: B739_1885
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Entry
B739_1885 CDS
T02331
Name
(GenBank) Recombinational DNA repair protein (RecF pathway)
KO
K06187
recombination protein RecR
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B739_1885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rag03400
]
B739_1885
DNA repair and recombination proteins [BR:
rag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B739_1885
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B739_1885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_ZnF
Toprim
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AFR36469
UniProt:
J9R3L7
LinkDB
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Position
complement(1970904..1971512)
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AA seq
202 aa
AA seq
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MNFPSKVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGEAIQNLVTEIKYCKE
CHNFSDTDICEICADDSRHAELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGP
QQLNIETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKKFKHFDIKFSNIARGISVGDE
LEYADEVSLGRSILNRIPYKGH
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaattttccaagtaaggttttagaaaaggcagtagaagaaatatcgggacttccaggg
ataggtagaaaatcagctcttaggttagctcttcatttgcttagacaacctagttcacaa
gggctagctctaggtgaggctatacaaaatctagttacagagataaaatactgtaaagaa
tgccataacttttcggacacagatatttgcgaaatttgtgcagatgacagtagacacgct
gaactcctatgcgttgtggaagatgtgagagatgtaatggcgatagaaaatacagggaaa
ttcaaagggaaatatttggttctaggagggaaaatatcacctatggaaggcattggtcct
caacaattaaatatagaaaccctagaaagcaaactagaaataggggagatagaggaggtt
atttttgcactatctgccactatggagggcgataccaccgtgtattatttgtataaaaag
tttaagcattttgacattaaattctccaatattgcaagagggatttccgtaggagatgaa
ctagagtacgccgatgaagtttctttggggaggtctattttgaaccgaataccttataaa
ggtcattaa
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