Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1428
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Entry
RA0C_1428 CDS
T02107
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00300
Lysine biosynthesis
rai00470
D-Amino acid metabolism
rai00550
Peptidoglycan biosynthesis
rai01100
Metabolic pathways
rai01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RA0C_1428
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RA0C_1428
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA0C_1428
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RA0C_1428
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rai01011
]
RA0C_1428
Enzymes [BR:
rai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RA0C_1428
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RA0C_1428
Peptidoglycan biosynthesis and degradation proteins [BR:
rai01011
]
Precursor biosynthesis
Amino acid ligase
RA0C_1428
Racemase
RA0C_1428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AFD56323
UniProt:
E4TAG0
LinkDB
All DBs
Position
complement(1434236..1436680)
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AA seq
814 aa
AA seq
DB search
MNYTARQIAEITGAKLIGAGDKIIKHFAFDSRIIYSPKNTGFVAIKTKKNNGEKYIASAV
EKGIELIVSEHKTLDNEHLSWLIVDDTVKFLQKLAHLHLKSHNIQTIGITGSNGKTIVKE
WLYQCLSEDIRCVKSPKSFNSQIGLPLSLLNIKPEHKVGIFEVGISEPNEMTTLETIFSP
KIGVLTHIGSAHISNFKSEKHLVDEKISLFKDSESIIFNGDNILVSNKINTLYSSKNLIS
YGFNKDNNIHISSNWKDRQQPITVQCFDKSFSFPAQQRDEATLSNVLAIIAVMHLLEFST
EKMIEKINNLKAVEMRLESVNGIKNNLIINDSFNLDLDSLKIAFEFIKSYQKPKKSLIIT
DFTEKSDADNLYQEVASLINEQNFNKVFLIGEEISQYQHLLNTESFSFNTTNDLFSNQEF
KDLENELILLKGARKFEIEQVKTYLELQKHDTVLEVNLNNLLHNINVHKSLLKPETKIMA
MVKAYSYGLGGYEIAEFLQHHHIDYLGVAVADEGVELRKNGITVPIVVMNPEQHSYNTII
EYNLEPNIYSFRVLELFHKQLKQNGYEGRYPIHIKLETGMHRLGFKEDEIDQLKDYLNQM
SVKVESIFSHLSSSDIPQEKDYTLAQCQKFDKLSQNIIKDLNYKPLRHILNSAGITNYTY
YQMDMVRIGIGMMGISASPEIQPLLNPVVAFKSVISQISEIQPNDSVSYGRRYKASKSTR
IATIPVGYADGVPRLLSNGVGYVGIKNTLCPIVGSVCMDMMMVDISDLPTKEGDEVTIFH
EKPSLEDFAMYSQTIPYEVLTSISRRVKRVYIKD
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaccgcaaggcaaattgccgaaatcacaggagcaaaactgattggtgctggc
gacaaaattattaaacattttgcctttgatagccgcattatctattctcccaaaaacaca
ggattcgtagccattaaaactaaaaaaaataacggcgaaaagtatattgcttctgcggta
gaaaagggtatagaactcattgtttcggaacataaaactttggataacgaacatctctcg
tggctcattgtagatgacaccgtaaaatttttacaaaaattagcccatctacatcttaaa
tctcacaacatacaaaccatcggaattacaggcagcaacggaaaaaccatcgttaaagaa
tggctctatcaatgcttatccgaagacattagatgcgttaaaagcccaaagagttttaac
tctcaaattggtctacctttatctctcctaaatataaaacccgaacataaagtaggtatt
tttgaagtgggtatttccgaacccaatgagatgacaactttagaaacaattttctcacca
aaaataggcgttttaactcacattggctcagctcatatttctaattttaaatctgaaaag
catcttgtagatgagaaaataagcctttttaaagattctgaaagcatcatatttaatgga
gacaacattctagttagtaataaaataaacacactatattcaagtaaaaatttaatatca
tacggatttaataaggataacaatattcacatttcttcgaattggaaagaccggcaacaa
cccattactgttcaatgctttgataaatctttctctttcccagctcagcaaagagacgag
gctactttatccaacgtgttagccatcatagccgtgatgcatctgttggaattttctaca
gagaaaatgatagaaaaaattaacaatctgaaagcggtggaaatgaggctagaaagcgtt
aatggcattaaaaacaacctcatcatcaacgattcttttaatctagatttagactctctc
aaaatcgcttttgaatttattaaaagttaccaaaaacctaaaaagtctttaatcattact
gattttacagaaaaatcggacgcagacaatctataccaagaagtcgcaagtcttatcaat
gagcaaaattttaataaagtttttttaattggagaggaaatcagccaatatcaacacctt
ttaaatactgaaagctttagtttcaatactaccaatgatttatttagtaatcaagaattt
aaagatttagaaaatgagcttatcctcctcaaaggagcaagaaagtttgaaatagagcaa
gtaaaaacttacctagaactacaaaagcacgatacggtactagaggttaatctaaacaat
ctactccacaacatcaatgttcacaaatcattgctaaaacccgaaactaaaatcatggca
atggttaaagcttactcttatggactaggtggttacgaaatagcagagtttctacaacat
caccatatagattatttaggcgttgctgttgcagacgaaggtgtagaacttcgtaaaaac
ggaattacagttcccatcgtggtaatgaacccagagcagcacagctataataccattata
gaatataatctagagcctaacatctatagtttcagagttttagaactattccacaaacaa
ctaaaacaaaacggttacgagggaaggtatcccattcacatcaaactagaaacaggcatg
catcgtcttggttttaaagaagatgagatagaccaattaaaagactacttaaatcaaatg
agtgtaaaggtagaaagtattttcagccatctttctagttctgacattcctcaagaaaaa
gactataccttggcacaatgccaaaaatttgataaactttcacaaaacatcatcaaagac
ctaaactataaaccactaaggcatatcctcaattcggcaggaattaccaattacacctat
tatcaaatggatatggtaagaattggcatcggcatgatgggaatttccgcctcacccgaa
attcagcctttattaaatcctgtagtggcattcaaatctgttatttctcaaatttcggaa
atccaacccaatgatagtgtaagctacggcagacgctacaaagcctctaaaagcacaagg
atagctaccatacccgtgggatatgcagacggtgtccctcgcctgttaagtaatggcgta
ggctatgttggtattaaaaatactttatgccctattgtaggtagtgtttgtatggatatg
atgatggtggatatttctgacctccctaccaaagaaggcgacgaggtaaccatattccac
gaaaagccttctctagaagacttcgcaatgtattcacaaacgataccttacgaagtactc
acctctatttctagacgagtgaaaagagtttatattaaagattaa
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