Ruminococcus albus: Rumal_3970
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Entry
Rumal_3970 CDS
T01387
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ral
Ruminococcus albus
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ral01011
]
Rumal_3970
Enzymes [BR:
ral01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Rumal_3970
Peptidoglycan biosynthesis and degradation proteins [BR:
ral01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Rumal_3970
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
DUF4389
Cloacin
Motif
Other DBs
NCBI-ProteinID:
ADU24393
UniProt:
E6UL47
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All DBs
Position
pRUMAL02:334590..335408
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AA seq
272 aa
AA seq
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MAARTTSKTSANRSPRKKKSSTGDLIAVLLGVAAAVAVVMFLVFLFKRGVSQGLREVKDK
TSDYVPSGFTYPTKYEEYVIKYCKEYDTDPVLVFSVIKVESNFQPKATSNVGARGLMQLM
EDAYDWVKFRLDDDSESYEDMYDPETNIKYGTYYLSFLMDRYDDSIDLAAAAYHCGMGQV
DSWLEDGTISAEKFDVNDIPKENDQTSHYVNKINDAYTAYKKILSERGIDSLYTDPSSED
ATESGEDTEESETYDDYYADNYEDYGDTEYIY
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcaagaacaacaagtaaaacttctgcaaatagaagtccaagaaaaaagaaaagc
tcaaccggcgatctgatagcagtgctgttaggtgtagcggcagctgtcgcagtagtaatg
ttcctggttttccttttcaaacgaggtgtaagccaaggactcagggaggtaaaagataag
acttcggattacgtacccagcggctttacataccccactaaatatgaggaatatgttata
aaatactgcaaagaatatgatacagaccctgttcttgtgttctcggtgataaaggtggaa
agcaacttccagccaaaagccacatcaaacgttggcgcaagaggtcttatgcagcttatg
gaggatgcctatgactgggtgaaattcaggctggatgacgacagcgagagctatgaggat
atgtacgatcccgaaacaaatataaaatacggaacatattatctcagctttctcatggac
agatacgatgattccatagaccttgcagcggcagcttaccactgcggtatgggtcaggtg
gacagctggctggaagacggcactatcagcgctgagaaattcgacgttaatgatatcccg
aaagagaacgaccagacttcacattacgtaaacaagataaacgatgcctatacggcttac
aagaagatactctccgaacgcggtatagacagcttatataccgatccttcatcggaagac
gcaacggaatccggagaagatacggaagaatctgaaacatacgatgactactacgccgat
aattacgaagattacggcgatacagaatatatttattaa
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