Rhodococcus antarcticus: RHODO2019_01705
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Entry
RHODO2019_01705 CDS
T09186
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rant03021
]
RHODO2019_01705
Transcription machinery [BR:
rant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RHODO2019_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_38
Rpf1_C
HTH_23
Penicil_amidase
Motif
Other DBs
NCBI-ProteinID:
UZJ25240
LinkDB
All DBs
Position
complement(336214..336912)
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AA seq
232 aa
AA seq
DB search
MSARPLSSAPSPRDGADPVEPPRTDPVDPAAPALEIVAEPHPLGRTDAEERDVLATWALV
HAAQAGDTAAFGALYDRYVDMVFRFVLYRVGDRLLAEDLTSEAFLRALRRITSVSYQGKD
VGAWFVTIARNLVLDHVKSSRYRLEVTTSEFRDSDSSDDPEAEVVAGAVNAALMECVDQL
GEDQRECISLRFLQGLSVAETAVVMGRNEGAVKALQHRAVRRLASLVPADLR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcgaccgttgtccagcgcccccagcccccgcgacggcgccgatccggtcgag
ccccccaggaccgaccccgtcgacccggcagcacctgcgctggagatcgtggccgagccg
cacccgctgggccgcaccgacgccgaggagcgcgacgtgctggcgacgtgggcgctggtg
cacgcggcccaggccggcgacacggccgccttcggcgccctctacgaccgctacgtcgac
atggtcttccggttcgtcctctaccgcgtgggcgaccggctgctcgccgaggacctcacc
agcgaggcgttcctgcgagcgctgcgccggatcacctcggtgagctaccagggcaaggac
gtcggcgcgtggttcgtcaccatcgcccgcaacctcgtgctcgaccacgtgaagtccagc
cgctaccggctggaggtgaccacctcggagttccgcgactccgactcctccgacgacccc
gaggcggaggtggtcgccggcgcggtgaacgccgcgctgatggagtgcgtggaccagctc
ggggaggaccagcgcgagtgcatctccctccgcttcctgcagggtctctccgtcgccgag
acggccgtggtgatgggacgcaacgagggtgcggtcaaggcgctgcagcaccgcgccgtc
cgtcgcctggccagcctcgtcccggctgacctccgctga
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