Rhodococcus antarcticus: RHODO2019_04400
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Entry
RHODO2019_04400 CDS
T09186
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHODO2019_04400 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_04400 (mutM)
Enzymes [BR:
rant01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RHODO2019_04400 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RHODO2019_04400 (mutM)
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHODO2019_04400 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
FlhC
NFACT_N
TackOD1
Motif
Other DBs
NCBI-ProteinID:
UZJ25699
LinkDB
All DBs
Position
886039..886932
Genome browser
AA seq
297 aa
AA seq
DB search
MPELPEVEVVRRGLAEHLLGRIVTSVEVRHPRAVRRHVAGADDLAAQLTGARVLTADRRG
KYLWLEVEGPAQRDRTALVVHLGMSGQMLVQPAGAPDEKHLRIRVRLRPHDGEPDAPELR
FVDQRTFGGWAVEPLVEVDGAWLPRPVAHIARDPLDPAFDLEAVVTALRKRRTELKRALL
DQTLVSGIGNIYADEALWRAQLHGRRPTDVISRPQVRTVIGAATEVMTAALAQGGTSFDA
LYVNVNGASGYFDRSLDAYGQQDRACARCGAAIVREQFMNRSSFSCPHCQPPPRRRR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctccccgaggtggaggtggtgcggcgcggcctggccgagcacctcctcggg
cggatcgtgacctccgtcgaggtccgtcacccccgcgccgtgcgccgccacgtggccggg
gcggacgacctcgccgcccagctgaccggcgccagggtgctcacggccgatcgccgcggg
aagtacctgtggctggaggtggagggccccgcgcagcgcgaccgcaccgccctggtggtg
cacctgggcatgagcgggcagatgctggtgcagccggccggggcccccgacgagaagcac
ctgcgcatccgggtgcggctgcgcccgcacgacggggagcccgacgcccccgagctgcgg
ttcgtggaccagcggaccttcgggggctgggcggtggagccgctggtggaggtggacggc
gcgtggctgccgcgcccggtggcccacatcgcccgcgaccccctggaccccgccttcgac
ctggaggccgtggtgacggcactgcggaagcgacgcaccgagctcaagcgcgcgctgctg
gaccagacgctggtctccgggatcggcaacatctacgccgacgaggccctgtggcgggcg
cagctgcacggccgccgccccaccgacgtgatcagccggccccaggtgcgcaccgtgatc
ggggccgccaccgaggtgatgaccgcggccctggcccagggcggcaccagcttcgacgcg
ctgtacgtcaacgtgaacggcgcgtcgggctacttcgaccggtccctggacgcctacggc
cagcaggaccgcgcgtgcgcccgctgcggcgcggcgatcgtgcgggagcagttcatgaac
cgcagctcgttcagctgcccgcactgccagccacctccgcggcgccggcgctga
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