Rhodovastum atsumiense: RHOA_1875
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Entry
RHOA_1875 CDS
T08162
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHOA_1875 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_1875 (priA)
Enzymes [BR:
rap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHOA_1875 (priA)
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHOA_1875 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
PriA_CRR
Helicase_C
zinc-ribbons_6
DZR
AAA_30
HTH_20
zf_Rg
zinc_ribbon_12
zinc_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
CAH2600473
LinkDB
All DBs
Position
RHOA:complement(1936981..1939215)
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AA seq
744 aa
AA seq
DB search
MAGMDRKRGRQDALPIAPPASGSTPQRRVPVLLPYPFAGPFDYRVPAGLEVAPGDLVLVP
LNRREEVGVVWDGPADGTVGDNRLRPVSALIDGPPMRADLRRLIDWIASYTLAPPGDVLA
MALRVNALRPDPVPVGWCLAAPLPETRLTEPRRRVLDALAGGGMAGAELCRVAGVSPGVL
RAMAEAGLLLPCAVPRPVPFERPAPDHPGPQLSPGQEAAATALREAVRARGFSVTLLDGV
TGSGKTEVYLEAVADCLRIGRQALVLLPEIALSAQWLDRFTRRFGVAPAIWHSDLTAKLR
RTTWRAVAAGEAPVVVGARSALFLPFPDLGLVVVDEEHETAFKQEDGVVYHARDMAVVRA
RLCEAPAVLVSATPSLETVANVEAGRYRRVHLPSRHGGASLPGIVLVDLRVTPPERGRFL
SPPLVEAVRATFARNEQAMLFLNRRGYAPLTLCRACGHRIQCPNCTAWLVEHRARRELQC
HHCGHATEIPARCPECGAEHSLAPVGPGVERITEEAAALFPDVRRLVMASDTLPGPHASA
EAARAIAAREVDLIIGTQIVAKGWHFPHLTLVGVVDADLGLAGGDLRAAERTVQLLHQVA
GRAGRAEAPGRVLLQTFSPEHPVMQALLSGDLAEFMAREAAQRRPGNWPPYGRLAALIVS
ADTAEAADVTARDLGRAAPTGEGIVVLGPAPAPLSILRGRHRRRLLLKTRRDIAVQPLLR
DWLAAVPVRGSVRVDVDVDPVSFL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggccggcatggaccgaaagcgcgggcggcaggatgccttgcccattgccccccccgca
tccgggagcaccccccaacgccgggtcccggtgctgctgccctatcccttcgccggcccg
ttcgactaccgcgttcccgcagggctggaggtggcccccggcgacctggtgctggtgccg
ctgaaccggcgcgaggaagtcggcgttgtctgggacgggccggccgacggcacggtcggc
gacaaccggctgcgcccggtctccgccctgatcgacggcccgccgatgcgcgccgacctg
cgccggctgatcgactggatcgcttcctataccctggccccgccgggggatgtgctggcg
atggcgctgcgggtgaacgcgctgcgtccggacccggtcccggtcggctggtgcctggcc
gcgcccttgccggagacccggctcaccgagccgcgccggcgcgtgctggacgcgcttgcc
gggggcggcatggcgggggcggagctctgccgggtggccggggtctcgccgggcgtgctg
cgcgccatggcggaggccggcctgctgctgccctgcgcggtgccccgtcccgtgccgttc
gagcgtcccgcgcccgaccatccggggccgcagctctcgcccgggcaggaggcggcggcg
acggcgctgcgcgaggcggtgcgggcacgcggcttctcggtgacgctgctcgacggggtc
accggttctggcaagaccgaggtctacctggaggcggtggcggactgcctgcgcatcggc
cggcaggcgctggtgctgctgccggagatcgcgctgtcggcgcaatggctggatcgtttc
acccgccgtttcggcgtggcgccggcgatctggcactccgacctgaccgcgaagctgcga
cggaccacctggcgggcggtggcggcgggggaggcgccggtggtggtgggggcgcgctcg
gcgctgttcctgcccttccccgatctcggcctggtggtggtggacgaggagcacgagacc
gcgttcaagcaggaggacggggtcgtctatcacgcccgcgacatggcggtggtgcgggcg
cggctgtgcgaggcaccggcggtgctggtttcggcaacgccgagcctggagacggtggcg
aatgtcgaagccggccgctaccgccgcgtccatctgccttcccggcacggcggtgcctcg
ctgcccggcatcgtgctggtcgacctgcgcgtcaccccgcccgagcgtggccggttcctc
tccccgccgctggtggaggccgtgcgcgcgacctttgcccgcaacgagcaggcgatgctg
ttcctcaaccggcggggctatgcgccgctgacgctgtgccgcgcctgcgggcaccgcatc
cagtgcccgaactgcacggcgtggctggtcgagcaccgggcccggcgggaactgcagtgc
caccattgcggccacgccaccgaaattccggcgcgctgcccggaatgcggcgccgagcac
agcctcgccccggtcggaccgggggtggaacgcatcaccgaggaagcggccgccctgttc
cccgatgtgcggcgcctggtcatggcttccgatacgctgccggggccgcatgcctcggcc
gaggcggcgcgggcgatcgcggcgcgcgaggtcgacctgatcatcggcacccagatcgtc
gccaagggctggcatttcccgcatttgacgctggtgggggtggtggatgccgatctgggg
ctggcggggggcgatctgcgcgcggccgagcgcacggtgcaactgctgcaccaggtcgcc
ggccgggccggccgggccgaggcgcccgggcgggtgctgctgcagaccttctcgcccgag
catccggtgatgcaggcgctgctctcgggcgatctcgcggagttcatggcgcgcgaggca
gcgcagcgacggccgggcaactggccgccctatgggcggctggcggcgctgatcgtctcg
gccgacacggcggaggcggcggacgtgacggcgcgcgacctcggccgcgccgccccgacg
ggggaggggatcgtggtgctcggccccgccccggcgccgctgtcgatcctgcgcggccgg
caccggcgtcggctgttgctcaagacccggcgcgacatcgccgtgcagccgctgctgcgg
gactggctggcggccgtgccggtgcgcggcagtgtacgggtggatgtagatgtggacccc
gtgagctttttgtga
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