Riemerella anatipestifer RA-GD: RIA_1864
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Entry
RIA_1864 CDS
T02007
Name
(GenBank) 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00020
Citrate cycle (TCA cycle)
rar00785
Lipoic acid metabolism
rar01100
Metabolic pathways
rar01110
Biosynthesis of secondary metabolites
rar01120
Microbial metabolism in diverse environments
rar01200
Carbon metabolism
rar01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RIA_1864
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RIA_1864
Enzymes [BR:
rar01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RIA_1864
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ADZ12924
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Position
1858388..1861147
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AA seq
919 aa
AA seq
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MDKFSFLNATHADFIDSMYQQYLKYPDSLEPSWKAFFQGFDFALENFGEDDSFTEKVGAS
SLSQQVGVPDDIIKEFKVLNLIEAYRTRGHLFTRTNPVRERRTYLPDLSIENFGLSKSDL
DTKFNSATETGMLGAATLADIIRHLDQIYCDSIGIEYMHIREVEEKEFIRQWISKNENHP
ELSADEKIQILSKLNQAVAFENYLHTKFVGQKRFSLEGGESLIPALDQLISRSSKHGVDE
VVLGMAHRGRLNVLTNIFGKSYKQIFSEFEGKEFEEDVFSGDVKYHLGSTTKIKTAAGEE
VIINLTPNPSHLETVASLVQGISRAKIDHTYGNNFKKVLPIVIHGDAAIAGQGIVYEIAQ
MMTLDGYKTGGTVHIVVNNQVGFTTNYLDARSSTYCTDIAKVTDSPVMHVNADDVEAVVH
AIRFAADYRAAFGKDVYIDLLGYRKYGHNEGDEPRFTQPKLYNTIAKHPNPREIYKVKLE
KEGVLSEGVLKKMEEEFKTLLDKDFDASKEIQKNTLDVFMEQVWIKYLDPANKQKVLKAV
ETQYNAEQLKELAVKMSSLPKDKAFIRKITRLFEQRLKMIEEDKLDWAMAELLAYATLLA
EGYNVRISGEDVERGTFSHRHAVVKTEDAEEEYVPLQHINESQQFHIYNSLLSEYAVLGF
DYGYAMASPDTLTIWEAQFGDFVNGAQIIVDQYLVAAEEKWKLQNGLVMLLPHGSEGQGA
EHSSARLERFLTLCANNNIFVANCTVPANYFHLLRRQMKFPFRKPLVVMTPKSLLRHPKV
ISSMEELANGSFQPVIDDATADASKVERLVMCSGKVYYDLLAKKEELGDEKVALVRLEQL
YPLDSEKIETVLSKYSNRKDFVWVQEEPENMGAWSYILRNFRKYDVQVIAPVPSGTPAPG
SHKKYEINQTNVINQTFGI
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggataaattttcattcttaaatgcaacacatgctgatttcatagatagcatgtaccag
cagtacttaaaatacccagatagtttagagccatcttggaaagctttttttcaagggttt
gattttgctctagaaaattttggtgaagacgattcttttacagaaaaagtaggtgcgtct
tctttatctcagcaagtaggtgtcccagatgatattataaaggagtttaaagttcttaac
ttaatagaggcttatagaactagaggtcatttgtttactagaactaaccctgttagagag
agaagaacttatctccctgatttatctatagagaattttggattatcaaagtcagattta
gatactaaatttaactctgctacagaaacaggaatgctgggagctgctactttggcagac
attattcgtcatttagaccaaatttattgcgactctatcggtatagaatatatgcatatt
cgtgaggtggaggagaaggaatttattcgccagtggatttctaagaatgaaaatcaccca
gaactttcggcagacgaaaaaatacagattttatctaagctcaatcaagcggtagcattt
gaaaactatcttcatactaaattcgtaggacaaaagagattttcactggaaggaggagag
tctttaatccctgctttagaccagcttattagtcgttcttcaaaacatggtgtagatgaa
gtggttttgggtatggcacacagagggaggcttaatgtattaactaatatctttgggaaa
tcatacaagcaaatcttctctgaatttgaaggtaaagaatttgaggaagatgtattttct
ggagatgttaagtatcacttaggttctactacgaaaataaaaacggctgcaggagaagag
gtaattatcaatttaacgcctaacccgtctcacttagaaactgtagcttctttagtacaa
ggtatttctagagctaaaatagaccatacttacggtaataattttaaaaaagtattaccg
attgttatccatggagatgcagctattgcaggacaaggaattgtctacgagattgcacaa
atgatgactttagacggctacaagacaggaggaacggttcatattgtagttaataatcag
gtaggatttacaaccaactatctagatgcgaggtcttctacttattgtacggatattgct
aaggtaacagactcgcctgtgatgcatgtaaatgcagatgatgtagaggctgtggtacat
gcaattagatttgcggcagattatagagcagcgtttggcaaagatgtttatatagatttg
ttaggatacagaaagtacggacataacgaaggtgatgagcctcgttttacgcagcctaaa
ctttataataccattgcgaaacaccctaatcctagagaaatatataaagtaaaactagag
aaagaaggagtgctttctgaaggagtgttgaagaagatggaggaagaatttaaaaccctt
cttgataaagattttgatgcatctaaagaaattcaaaaaaatactttagatgtatttatg
gaacaggtttggattaagtatctagaccctgcaaataaacaaaaagttctaaaggctgta
gaaactcaatacaatgctgaacagttaaaagagttggcagttaagatgtcttctttacct
aaagacaaggcgttcataagaaaaatcactagactttttgaacaaaggctaaaaatgata
gaagaggataagttagattgggcaatggcagaacttttagcttatgctacgcttcttgca
gaagggtacaatgtgagaatttctggggaagatgtggagagaggtactttctctcaccgt
catgcagtggtaaaaacagaagatgcagaggaggaatatgtaccattacaacatatcaac
gaaagtcagcagtttcatatttataactcattactatcagagtacgctgttttagggttt
gattatggttatgctatggcatcgcctgatactttaaccatttgggaagcacagtttgga
gatttcgtgaatggcgctcaaattattgtggaccaatatttggtagctgcagaagaaaaa
tggaagctgcaaaatggtttggtaatgttgttacctcacggctctgaagggcaaggtgca
gaacactcttcggctaggttagagagatttttaacgctttgtgctaataataatattttc
gtagctaactgtacagttccagccaattatttccatttattgagaaggcaaatgaagttt
ccgtttagaaaaccgttagtggtaatgacacctaagtcgttactaagacaccctaaggtt
atttcttctatggaagagttagcaaacggaagtttccaaccagtgattgatgatgctacg
gctgatgcttctaaggtggagagattagtgatgtgttctggtaaggtttactacgattta
ttggctaaaaaagaggaattgggagatgagaaagtagctttagtaaggctggagcagtta
tatcctttggattcagagaaaatagagactgtgttgtctaaatattctaacagaaaagat
tttgtatgggttcaagaagagccagagaatatgggagcttggtcttatattttgagaaat
ttccgcaagtatgatgtacaagtaattgcaccagttcctagtggaacgccagcaccaggt
agccataagaagtatgagattaaccaaactaatgtaattaaccaaacatttggtatctag
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