Riemerella anatipestifer CH3: M949_0953
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Entry
M949_0953 CDS
T03250
Name
(GenBank) tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat00020
Citrate cycle (TCA cycle)
rat00620
Pyruvate metabolism
rat01100
Metabolic pathways
rat01110
Biosynthesis of secondary metabolites
rat01120
Microbial metabolism in diverse environments
rat01200
Carbon metabolism
Module
rat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M949_0953
00620 Pyruvate metabolism
M949_0953
Enzymes [BR:
rat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
M949_0953
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fumerase_C
Fumerase
Colipase_C
Motif
Other DBs
NCBI-ProteinID:
AIH02122
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Position
966585..968192
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AA seq
535 aa
AA seq
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MEFHYQEPFPILKDDTPYKKLTSEYVKVEKLGDREILTVDPKGLELLAENALADVSFMLR
PTHLQKLKNIIDDPEATDNDRFVAYNLLQNAAVAVEGALPSCQDTGTAICVAKKGEDVYT
GVNDAEWISKGIYNTYQSKNLRYSQIVPLTMFEEKNSGSNLPAQIDIYANKGCEYHFLFL
AKGGGSANKTFLYQKTKSLLNEKNLEAFVKEKIMDLGTAACPPYHLALVIGGTSAEANLA
AVKKASAGYYDNLPTEGNMGGQAFRDLEWEKKVQEICQKSAIGAQFGGKYLTHNVRVIRL
PRHAASCPVGMGVSCSADRNIKGKITKDGIFLEQLEENPKKFLPETPPHLEAPVEIDLNR
PMNEILAELSKYPIKTRLKLKGTLIVARDIAHAKIKELLDSGQPMPEYFKNHPIYYAGPA
KTPEGMPSGSFGPTTAGRMDPYVDEFQKHGGSMIMLAKGNRSKEVTDACAKYGGFYLGSI
GGPAAILAKENIKSVEVVDFPELGMEAVRKIEIEDFPAFIITDDKGNDFFSSIAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcattaccaagaacctttccctattctaaaagacgacacgccttataaaaaa
cttacttccgagtatgtaaaagtggagaaattaggagatagagaaattttaaccgtagac
cctaaaggactagaacttttagcagaaaatgctttagcagatgtttcttttatgctacgc
cctacccatttacaaaaattaaaaaacattattgatgacccagaagctaccgataacgac
cgctttgtagcgtacaatctccttcaaaatgcggctgttgccgtggaaggtgcattacca
tcttgccaagatacaggtacagcaatatgcgttgcaaaaaagggagaagatgtttatact
ggcgtaaatgacgctgaatggataagcaaaggaatttacaacacctatcaatctaaaaat
ttaagatattctcagattgtacctctaacaatgttcgaggagaaaaattctggttctaac
cttcctgcacagatagatatttatgccaacaagggctgcgaatatcatttcttattctta
gcaaaaggaggaggttctgccaacaagactttcctttatcaaaaaactaaatcgctactt
aatgagaaaaatttagaggcttttgtaaaggaaaaaattatggatttgggaacagctgct
tgtccgccgtaccatttagctcttgttattggtggaacttcagcagaagccaacttagct
gctgtaaagaaagctagtgcgggttattatgacaatctcccaacagaaggcaatatgggt
ggacaagcctttagagatttagaatgggaaaagaaagtacaagaaatttgtcaaaaaagt
gctattggagctcaatttggtggaaaataccttacacataatgtaagagtaatccgttta
cctcgccacgcagcaagttgccctgtaggcatgggtgtatcttgttctgcagaccgaaac
ataaaaggaaaaatcactaaagatggtatctttttggaacaattggaagaaaatccaaaa
aaattcttaccagaaacaccacctcatctagaagctccagtagaaattgaccttaaccgt
ccaatgaacgaaatcctagctgagctttctaaatatcctatcaaaacgaggttaaaactt
aaaggtactctcattgttgctagagatatagcacatgctaaaataaaagaacttttagat
tcaggtcagccaatgcctgagtactttaaaaatcatcctatctactacgctggaccagct
aaaactccagaaggaatgccatcaggaagtttcggaccaacaaccgcaggaagaatggac
ccttatgtggacgaattccaaaaacatggcggaagtatgattatgctggctaaaggtaac
agaagtaaagaggtaaccgatgcttgtgctaaatacggcgggttctatctaggctctatt
ggtggtcctgctgcaatacttgccaaagagaatattaaatctgtggaagtggtagatttc
cctgagttaggtatggaagctgtgagaaaaatagaaatagaagacttccctgcatttatc
attaccgatgataagggtaacgattttttctcaagcattgcacactaa
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