Rhodococcus aetherivorans: AAT18_07960
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Entry
AAT18_07960 CDS
T03876
Name
(GenBank) ATPase AAA
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rav
Rhodococcus aetherivorans
Pathway
rav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAT18_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rav03400
]
AAT18_07960
Enzymes [BR:
rav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AAT18_07960
DNA repair and recombination proteins [BR:
rav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAT18_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKE89180
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All DBs
Position
1703864..1707199
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AA seq
1111 aa
AA seq
DB search
MGAVAVQRDPGASVTRTVSKFDLLGALPTGTTVLEASAGTGKTYAIVGLATRFVAEGAAE
LSQLLLVTFSRAATQELRERTRDRFAGVARALADPEAARHHPDELIRHLAGGDVATHRRR
LLRALSDFDAATIATTHGFCQRMLDELGTAGERDTDAVLVEDVDDLTIEVIADLYLRRYG
RADRAPISHAEAAEAARAAVFDPQAALAPEGADGTPAGERVEFARAVRAEVDRRKRLAGL
RDYDDQLALLHAVLTDPEHGEAACRRIGSRFRVVLVDEFQDTDPLQWEILRSAFHRRTTL
VLVGDPKQAIYAFRGAEVLSYLGAMEFADGHQELVCNWRSDGNLLAALDHLYGGAALGDP
RIVAHPVEAAQPASRIAGAAPLRLRHLPRTGAGPCGASGFPKAQALQERVARDVAADVAA
LLGGDVTVDLGAGRRPVEPGDVAVLVRTNAQVALVHGALTGAGIPAVLAGGTSVFATPAA
REWLRVLQALEQPHRPDRVRLAALTSLMGRTAEDVDTRGDELVAAIGTLLRELDVVFERS
GFAALFERLAAFCDLEPRLLGWPGGERELTDLRHLAQLLDETASAEALGVTALTRWLTER
IAEAGTARADRSRRLDSDAAAVQVLTVHASKGLEFPVVYVPFAWESGVRSKPDRLLLHDD
DGRRVLDVGGEGSAGYGERRRRHDEEVAGEELRLLYVALTRARCHLVLWWAPGYSTSGAP
LHRMLFGRVPGTSEIAHKARVPEDPIVAQQLTGWAGRAAGTASVEAVGSAPIPAVTWVRP
HETVVELEAARFDRELDDAWRRTSYTALTAAAHEGPGAGAEAEQPAKTDEPEEPPLLPAA
AADDGIASPMNPLPGGAVFGTLVHAVLEVVDTAAADLGAELLRCCRDTVAEQFSDVDPEE
LAEALLPVLRTPLAGGAGTLADIAPADRLAELDFELPLAGGDDPVATTVTLDGVARLLRA
HLPAGDPFASYADLVGILEPTPLRGYLTGSIDSVLRIHGTEPRFVIVDYKTNRLGPEELT
TAHYTRDRMAEEMLRAHYPMQALLYAVALHRYLRWRLPGYDPAVHLGGVQYLFVRGMVGP
DTPAGCGVFDWAPPPALVAELSDLLAGKEVP
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
gtgggagccgttgctgtccaacgagatccaggggcgtccgtgacccgaaccgtgtcgaag
ttcgacctgctcggggcgctcccgacgggcaccaccgtgctcgaggccagcgcgggaacc
ggcaagacctacgccatcgtcggcctggccacccggttcgtcgccgagggggcggcggag
ctgtcgcagctgctgctggtgacgttcagccgcgccgcgacgcaggaactgcgcgaacgc
acccgggaccggttcgccggcgtcgcgcgggcgctggccgacccggaggccgcgcggcac
caccccgacgagctgatccggcacctcgccggcggcgacgtggccacgcaccggcgccgg
ctgctgcgggccctgtccgacttcgacgccgccaccatcgccaccacgcacggattctgc
cagcgcatgctcgacgagctcggtaccgccggcgagcgggacaccgacgcggtgctcgtc
gaggacgtcgacgacctgaccatcgaggtcatcgcggacctgtacctgcgccggtacggg
cgggcggacagggcaccgatctcgcatgccgaggccgcggaggccgcgcgcgccgcggtc
ttcgacccccaggccgccctcgcccccgagggcgccgacggcacgcccgccggggaacgc
gtcgagttcgcccgggccgtgcgggccgaggtcgaccggcgcaagcgcctcgcgggcctg
cgggactacgacgaccagctcgcgctgctgcacgcggtgctgaccgacccggagcacggc
gaggccgcgtgccgccgcatcggctcccgcttccgcgtcgtgctcgtcgacgagttccag
gacaccgacccgctgcagtgggagatcctgcgcagcgcgttccaccgccgcacgaccctc
gtcctcgtcggcgacccgaagcaggccatctacgcgttccgcggcgccgaggtgctgagc
tacctcggcgcgatggagttcgccgacggccaccaggaactcgtctgcaactggcgcagc
gacgggaacctgctcgccgccctcgaccatctgtacggcggtgcggccctgggtgatccg
cggatcgtcgcgcacccggtggaggcggcgcagccggcgtcccggatcgccggggcagcg
ccgctgcggctgcggcacctgccgcggaccggggccggcccgtgcggcgcctccggtttc
ccgaaggcccaggcgctgcaggaacgggtggcacgcgatgtcgcggccgacgtcgcggcc
ctgctcggtggcgacgtcaccgtcgacctcggggccggccgccggcccgtcgaacccggc
gacgtcgcggtcctggtgcgcaccaatgcgcaggtcgccctcgtccacggggcgctcacc
ggtgccgggatcccggccgtgctggccggcgggacgagtgtcttcgcgaccccggccgcg
cgggaatggctgcgggtgctgcaggcgctcgaacagccgcaccgccccgaccgggtgcgg
ttggccgctctgacctcgctgatgggccgcaccgccgaggacgtcgatacccggggcgac
gaactcgtcgccgcgatcggcaccctgctgcgcgaactggacgtcgtgttcgagcggtcc
ggcttcgccgcgctcttcgagcgcctcgccgcgttctgcgacctcgaaccgcggctgctg
ggatggccgggcggcgagcgggaactgaccgatctgcggcacctcgcgcaactgctcgac
gagaccgcgtcggccgaggcgctgggtgtcacggcgctgacccgctggctgacggaacgg
atcgccgaggcgggcacggcccgcgccgaccgcagccgccgcctcgacagcgacgccgcc
gcggtgcaggtgctcaccgtccacgccagcaagggcctcgaattccccgtcgtgtacgtg
ccgttcgcgtgggagtcgggcgtccggtcgaaacccgaccggctcctgctccacgacgac
gacggccgccgcgtcctcgacgtcggcggcgagggcagcgcgggctacggcgagcgccgc
cggcgccacgacgaggaggtggccggcgaggaactgcgcctgctctacgtcgcgctgacc
cgcgcccgctgtcacctggtgctgtggtgggctccggggtacagcacctccggtgccccg
ctgcaccgcatgctcttcggccgcgtgccgggcacctccgagatcgcccacaaggcgcgc
gtgcccgaggacccgatcgtggcgcagcagctgaccgggtgggccggccgggccgcaggc
acggcgtccgtcgaggccgtcggatcggcgccgatccccgccgtcacgtgggtgcggccg
cacgagaccgtcgtggaactcgaggccgcccgcttcgaccgcgagctcgacgacgcctgg
cggcgcacctcctacaccgccctcaccgccgctgcccacgaggggcccggcgcgggcgcc
gaggccgaacagcccgcgaagaccgacgaacccgaggaacccccgctgctgccggccgcc
gcggcggacgacggcatcgcgtccccgatgaacccgctgcccggcggggccgtgttcggc
accctcgtgcacgcggtgctcgaggtcgtcgacaccgcggccgccgacctcggggcggaa
ctgctgcgctgttgccgcgacaccgtcgccgaacaattctccgacgtcgaccccgaggag
ctggccgaggccctgctgccggtcctgcgcaccccgctcgccgggggcgcgggcacgctc
gccgacatcgctcccgccgaccggctcgccgaactcgacttcgagctgcccctcgccggg
ggtgacgaccccgtcgccaccaccgtcaccctcgacggtgtcgcccggctgctgcgtgcc
cacctgcccgccggcgacccgttcgcgtcctacgccgatctcgtgggcatcctcgagccg
accccgctgcgcggctacctcaccggcagcatcgattcggtcctgcggatccacggcacc
gagccgcgattcgtgatcgtcgactacaagacgaaccggctcgggccggaggagctcacc
accgcccactacacccgggaccggatggccgaggagatgctgcgcgcccactacccgatg
caggcgctgctgtatgccgttgccctgcaccggtatctgcggtggcggctgcccgggtac
gacccggccgtgcacctcggcggcgtgcagtacctgttcgtgcgcggcatggtcggcccg
gacacccccgcgggctgcggcgtgttcgactgggcgccgccgcccgccctcgtcgccgaa
ctgtccgacctgctggcaggcaaggaggtcccgtga
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