Rhodopirellula baltica: RB9374
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Entry
RB9374 CDS
T00134
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB9374 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rba03019
]
RB9374 (recQ)
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB9374 (recQ)
Enzymes [BR:
rba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB9374 (recQ)
Messenger RNA biogenesis [BR:
rba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RB9374 (recQ)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RB9374 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAD76227
UniProt:
Q7ULP2
LinkDB
All DBs
Position
complement(5021612..5023600)
Genome browser
AA seq
662 aa
AA seq
DB search
MEETGTDAENASIDPSMLSTRWAIAERVLSDAFGFDRLLPPQKKVIERLFDGRNVVAVMP
TGSGKSLCYQLVSQCLPHLTVVVSPLVALMKDQGDSLKRRGIEVARLDHSASPQELRLDL
KRVRSGHCKLLYVSPERFFNERFRAVLGETPISMLAVDEAHCMSEWGHHFRPDYLRLPDV
VEEHSIPQVLALTATAPQRVVREIRSAFGLERTDVVKVPTHRSNLHLQCTQVTSRERDER
LLEQLRKAAKSRSKGVTIVYVTRRRTAEQLAESLNEEGLSAMAYHAGLTSEQRDSIQQWF
LESNNGILVGTVAFGMGVDKPNVRRVIHYNPSSSLEGYSQEIGRGGRDGKATQCQTWLVP
EDQIAIRNLPCSDWPTKESVERLLDRLIGQPDSFYLSLGKLAWEVNLSSGVVGTFMIQLR
QRGHLELLPARYDVYRVKPRCDISEIVSRSDAIDPEAVSAIVASLVKAKRAYRVNLVVAT
RQYRVPRNRLVAALEELSLSGVIELESSELMHGYRWVERIARPAATVKHLLKRFDASMEA
TQQRIDSMMEFIACKECLPVAMAAHFGSRRSRPCGKCSTCRGEGPWDTQLNPPDSIGDSA
QRAMTDAIAEYPDLFSDPIDQAKFLCGLYTPAFMRFRVNRHFGFGVCESVPFTTVLAAMR
AN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacgggcacggacgccgagaatgcttccatcgatccaagcatgctttcaacc
cgctgggcaattgctgagcgggtgttgagtgatgcgtttggttttgatcgtttgctgccg
ccgcagaagaaggtcatcgagcgactgtttgacggtcgcaacgtggtcgcggtgatgccg
acgggaagtggcaaaagtttgtgctaccaactggtcagccaatgcttgccgcacctgaca
gtggttgtttcacccttggtcgctttgatgaaggaccaaggcgattcgctgaaacgacgg
ggcattgaggtcgccaggctcgaccattccgcctcgccgcaggaacttcgtttggacttg
aaacgggttcgttcgggccactgcaagttgctgtatgtttccccagaacgctttttcaat
gagcgttttcgtgcggtcttgggtgagacaccgatttcaatgttggcggtcgacgaagcc
cactgcatgagcgaatgggggcaccactttcggcccgattatcttcggttgccggacgtg
gtggaggagcatagcatcccgcaagtgttggcgctgacagcgacggcacctcaacgcgtc
gttcgcgaaattcgatcggcgtttgggttggaacgaactgatgttgtgaaggtccccacg
catcgatcgaatttgcatctgcaatgcacacaggtgacttcccgtgagcgggacgagcgg
ttgctggaacagcttcggaaggcagcgaagtcacgcagcaagggtgtcacgattgtctat
gtcactcgtcgccggaccgccgaacaactggccgagtcgctcaacgaagagggcctttct
gcgatggcctaccacgcagggttgaccagcgaacagcgtgattccattcagcagtggttt
ttggaatccaacaacggcatcttggtcggcacggtggcctttggcatgggcgtggacaaa
cccaatgttcgccgagtgattcactacaacccttcgtcgtcgttggaagggtacagccaa
gagattggacgaggcggccgggatggcaaagcgacccaatgtcaaacatggttggttccc
gaagaccaaatcgcgattcgcaatttgccgtgcagtgactggccgacgaaagagtccgtg
gaacgtttgttggatcggttgatcggccaaccggattcgttttatctgtcgctcggcaag
ctggcttgggaagtgaacttgtcttctggagtggtcggcacgttcatgattcagttgcgg
cagcgtgggcacctggagttgctgccggctcggtatgacgtttatcgcgtcaaaccaagg
tgcgacatttcggaaatcgtttcgcgaagtgacgcgatcgatccggaggcggtttccgcg
attgttgcctcgttggtcaaagccaagcgtgcgtaccgggtcaatttggtggtggcgacg
cgtcagtatcgtgtgcctcgaaaccgcttagtggcggcgctcgaagagttgtcgttgtct
ggagtcatcgagttagaatcgtccgaactgatgcatgggtaccgctgggtggaacgaatc
gctcggcccgcagcgacggtgaagcacttgttgaaacgttttgacgcgtcgatggaggca
acccagcaacgcatcgattcgatgatggaattcattgcctgcaaggagtgtttgccagtc
gcgatggcggctcatttcggttcacgccgttcgcgtccctgcgggaaatgctcgacttgt
cgcggcgaggggccgtgggatacccagttgaatccacctgattcgattggagattcggcc
caaagagcgatgaccgatgcgatcgcggaatatcccgacctcttttcagatccgatcgat
caggccaaattcctgtgtggcttgtacacgcccgctttcatgcgttttcgtgtgaaccgg
cattttggctttggtgtctgtgaatctgttcccttcaccaccgttttggcggcgatgagg
gcgaactga
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