Rhizobium bangladeshense: J2J98_26330
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Entry
J2J98_26330 CDS
T07228
Name
(GenBank) ATP-grasp domain-containing protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00470
D-Amino acid metabolism
rban00550
Peptidoglycan biosynthesis
rban01100
Metabolic pathways
rban01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J2J98_26330
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J2J98_26330
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
J2J98_26330
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rban01011
]
J2J98_26330
Enzymes [BR:
rban01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
J2J98_26330
Peptidoglycan biosynthesis and degradation proteins [BR:
rban01011
]
Precursor biosynthesis
Amino acid ligase
J2J98_26330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
TTL
ATP-grasp_3
RimK
CPSase_L_D2
ATPgrasp_ST
ATPgrasp_YheCD
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QSY91936
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Position
p3:69419..70432
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AA seq
337 aa
AA seq
DB search
MLIAVVCNSEFTGVINRFGQPYPQPPQPWPPEGRIVDNVLAALGEGGHETLLCQGNKTLL
AALEQFMPPDPLTGRPSGMVFNLAEGIQGEYRFTHVPGMLEMAGVPYTGSSPLGHGLTDD
KVISKMLMRDSGVPTPNFRVMRRGTESTGDLQFPLIVKPRHEDNSFGLRVVHDAAELRPA
IERIDAQYAQDSLVEEYIEGREINVALLGNEDLEVFPLVEHDLAQLDAKILTWEAKYLAA
AQPPKICPAKIGSRLVALLRDISIATFHACQCRDYARVDLRIDRSGKPFVLEINSMPGLS
RNSPYVLAAMAAGHSYSSSINGILDVAHKRYFEKGIQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctaatagcagtcgtgtgtaatagcgaattcacgggcgtaatcaaccgattcggccag
ccatatccgcaaccgccgcaaccgtggccgccggagggacgaatagttgacaatgtgctg
gcggcgctgggagaaggcggtcacgagacgctgctgtgtcaagggaataaaacactactc
gctgcgcttgagcagttcatgccacccgatccgctaaccggccgcccctcgggaatggtc
ttcaacttggccgaagggattcagggcgagtaccggttcacccacgttccaggaatgctc
gaaatggctggtgttccgtataccggatctagtccgcttgggcatggactgacggacgat
aaagtcatcagcaagatgcttatgcgcgatagtggcgtgccaacgccgaactttcgcgtc
atgcgtcgcggcaccgagagcaccggcgatctgcaatttccgttaatagtgaagccgcgt
cacgaggacaacagcttcgggctgcgagtcgtccatgacgcagctgaacttaggccggca
atcgaaaggatcgacgctcagtatgcacaagattcgctcgtggaagaatacatcgagggg
cgggaaatcaacgtagcgctgcttggaaatgaagatctcgaggtgtttcctctcgtggag
cacgatctcgcccaactcgacgctaaaattttaacctgggaagcgaagtacctggcggcc
gctcagccgccaaagatttgcccggcgaagatcgggagcagacttgtggcattactgagg
gatatttcgattgctactttccatgcttgccagtgccgcgactatgcccgcgtagatctt
cggatcgatcgttccggcaaaccttttgttctagaaatcaactcaatgccgggtctcagc
aggaactccccttatgtgctagccgcgatggctgcgggacacagctactcgagttcgatc
aatggcatccttgatgtcgcccacaagcggtattttgaaaagggaatccaatag
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