Rhodothermaceae bacterium RA: AWN76_003345
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Entry
AWN76_003345 CDS
T04780
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rbar
Rhodothermaceae bacterium RA
Pathway
rbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWN76_003345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbar03019
]
AWN76_003345
03016 Transfer RNA biogenesis [BR:
rbar03016
]
AWN76_003345
Enzymes [BR:
rbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AWN76_003345
Messenger RNA biogenesis [BR:
rbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AWN76_003345
Transfer RNA biogenesis [BR:
rbar03016
]
Prokaryotic type
tRNA degradation factors
AWN76_003345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
CvfB_2nd
bpX6
Motif
Other DBs
NCBI-ProteinID:
ARA92302
UniProt:
A0A1V0DBA1
LinkDB
All DBs
Position
804751..807060
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AA seq
769 aa
AA seq
DB search
MSQATLHEVEFAPGRVLQFETGRLAKQANGSVVVRLGDTMVLCTAVLSKDIREGQSFFPL
TVDYREKFSAGGRIPGGFIKREGRPTDKEVLASRLVDRSIRPLFPDGFYHEVQIIAYVIS
ADDRYDADVLAGNGASAALMLAGAPFDGPIAQVRIGRVDGEYIVNPTIEQTEAGDIDLVV
SGKADAIVMVEGEMKEISEEEMLEALEIAHEAIKKLCAAQHELVAKYGKVTPFEYTTTTE
PAALVERVRGLVQDRLSEHIRRPYEKQAFYEGISAIKDYACEQLLGPADPETGALAAATE
DGFTAQQIRDAVAVVEKEVMREMILAEGRRLDGRRLDEIRPIWCETGYLPRVHGSAIFTR
GETQVLASVTLGTAKDVQPVDQIFDTTDKTFYLHYNFPPFCTGEAKFLRGASRREIGHGY
LAERALSSVLPGIDEFPYTIRVNADVLESNGSSSMASVCSGSLALMDAGVPVRKAVAGVA
MGLISDGQRTAVLSDILGTEDHLGDMDFKLTGTRDGITACQMDIKIAGLSREIMMKALLQ
AREGRHHILDIMEQTLAAPRPELSRYAPRLTQITIDPEFIGAVIGPGGKVIQGIQRETDT
SINIEERDGLGYVTIAATSQEKAEAALALIRAIVTVPEVGEVYEGTVRALQSFGAIIEIL
PGKEGLLHISELDHGYVEKVEDYLQVGDKVKVQLIEVRSDGKLRLSRKPFLPRPEGSANG
EGRRSEGERRRGGSGGGRSGRGGRGGRGERGGRGERGGHRDERGGHRDD
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagccaccctgcatgaagtggaattcgcgcccgggcgcgtactgcaattcgag
acgggacgtctcgccaaacaggccaacggctccgtcgtcgtgcgcctgggggacacgatg
gtgctctgcaccgccgtgctgtccaaagacatccgggaggggcagagcttcttcccgctg
acggtcgactaccgggagaagttttccgccggcgggcggatccccggcgggttcatcaaa
cgagaaggccgtcccaccgacaaggaggtgctcgcctcccggctggtggaccgctccatc
cggccgctgtttccggacgggttctaccacgaggtccagatcatcgcctacgtgatctcg
gccgatgatcggtacgacgccgacgtgctggccggcaacggcgcctcggccgcgctgatg
ctggccggcgctcccttcgacggccctatcgcccaggtgcggatcgggcgcgtcgacggg
gaatacatcgtcaaccccacgatcgagcagacggaggcgggggacatcgacctcgtcgtc
tccggcaaggccgacgccatcgtgatggtggaaggggagatgaaggagatcagcgaggag
gagatgctggaggcgctggagatcgcccacgaggcgatcaagaagctctgcgccgcccag
cacgaactcgtcgccaagtacggcaaggttacgcccttcgagtacaccaccacgaccgaa
cccgccgcgctcgtcgagcgcgtccgcgggctggtgcaggaccgcctgagcgagcacatc
cgccgaccctatgagaagcaggcgttctacgaggggatcagcgcgatcaaggattacgcc
tgcgagcagctcctcggcccggccgatccggagaccggggcgctggcggcagccaccgag
gacggcttcacggcccagcagatccgggatgccgtggccgtcgtcgagaaggaggtgatg
cgggagatgatcctggccgagggccgtcgactcgacggtcgccgcctcgacgagatccgg
ccgatctggtgtgagacgggctacctgccgcgcgtgcacggctcggccatcttcacccgc
ggcgagacgcaggtgctcgcctccgtcacgctcggcacggccaaggacgtgcagccggtc
gatcagatcttcgacacgacggacaagacgttctacctgcactacaacttcccgccgttc
tgtacgggcgaggccaagttcctgcggggcgccagccgccgggagatcgggcacggctat
ctggccgagcgcgccctgtcgagcgtgttgccaggtatcgacgagtttccctacacgatc
cgcgtcaatgccgacgtgctggagtccaacggctcctcgtcgatggcgtcggtgtgttcg
gggtcgctggcgctcatggatgccggcgtgccggtccggaaagcggtggccggcgtggcc
atggggttgatctcggacgggcagcgcacggcggtcctgagtgacatcctcggcacggag
gaccatctgggcgacatggacttcaagctgaccgggacgcgggacgggatcacggcctgc
cagatggacatcaagatcgccgggctctcgcgcgagatcatgatgaaggcgctgttgcag
gcgcgtgaaggccggcatcacatcctggacatcatggagcagaccctggccgccccgcgc
cccgagctgtccaggtatgccccacgtctgacccagatcaccatcgaccccgagttcatc
ggggccgtgatcgggcccggcggcaaggtcatccagggcatccagcgggagacggacacc
tcgatcaacatcgaggagcgcgacggcctcggctacgtcaccatcgcggcgaccagccag
gagaaggccgaagcggctctcgcgctcatccgcgccatcgtgacggtgccggaggtcggc
gaggtctacgagggcaccgtgcgggcgctgcagtccttcggggccatcatcgagatcctg
cccggcaaggaaggcctgctgcacatctccgaactggaccacggctacgtcgaaaaagtg
gaggattacctccaggtcggcgacaaggtgaaggtccaactcatcgaggtgcgcagcgac
ggcaagctgcggctcagccgtaagccgttcctgccccggccggaaggcagtgccaacggt
gaggggcgccgcagcgagggcgagcgccgacgcggcggcagcggcggcggccggagtggc
cgtggcggtcgcggcggccgtggcgagcggggcggccgcggcgagcgtggcggtcaccgc
gacgagcgtggcggtcaccgcgacgactga
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