Rhinopithecus bieti (black snub-nosed monkey): 108526935
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Entry
108526935 CDS
T04641
Symbol
COL7A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108526935 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
Kunitz_BPTI
VWA_2
DUF4992
Interfer-bind
Fndc10
Motif
Other DBs
NCBI-GeneID:
108526935
NCBI-ProteinID:
XP_017723439
LinkDB
All DBs
Position
Unknown
AA seq
2951 aa
AA seq
DB search
MRLRLLVAALCAGILAGAPRVRAQHRERVTCTRLYAADIVFLLDGSSSIGRSNFREVRSF
LEGLVLPFSGAASAQGVRFATVQYSDDPRTEFSLDALGSGGDVIRAIRELSYKGGNTRTG
AAILHVADRVFLPQLARPGVPKVCILITDGKSQDLVDTAAQKLKGQGVNLFTVGIKNADP
EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTRPPDDSTSAPRDLVL
SEPSSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERQEVNIPAGETSVWLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVSGATGYHVTW
RVLSGGPTQQQELGPGQGSVLLRDLEPGTDYEVTMSTLFGHSVGPTTSLTARTDASVEQT
LRPVILGPTSILLSWNLVPEARGYRLEWRRETGLEPPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTGPELPVGPVMDLQATELPGQRVRVSWSPVPSATQYRII
VRSTQGVERILVLPGSQTAFDLDDVQAGLSYTVRVSARVGPREGSASVLTVRREPETPLA
VPGLRVVVSDATRVRVAWGPIPGASGFRISWSTGSGPESSQTLPPDSTVTDITGLQPGTT
YQVAVSVLRGREEGPAAVIVARTDPLGPVRTVHVTQAGSSSVTITWTRVPGATGYRVSWH
SAHGPEKSQLVSGEATVAELDGLEPDTEYTVHVRAHVAGVDGPPASVVVRTAPEPVGRVS
RLQILNASSDVLRITWVGVTGATAYRLAWGRSEGGPMRHQILPGNTDSAEIRGLEGGVSY
SVRVTALVGDLEGTPVSIVVTTPPEAPPALGTLHVVQRGEHSLRLRWEPVPGVQGFLLRW
QPEGGQEQSRVLGPELNSYHLDGLEPATQYRVRLSVLGPAGEGPSADVKARTESPRVPST
ELRVVDTSIDSVTLAWTPVSRASSYILSWRPLRGPGQVPGAPQTLPGISSSQRVTGLEPG
VSYIFSLTPVLDGVQGPEASVTQTPVCPRGLADVVFLPHATQDNAHRAEATRRVLERLVS
ALGPLGPQAVQVGLLSYSHRPSPLFPXMGSYDLGIILQRILXHAYMDQVGTTWGLTCPSF
QHAVVTAHQIRCGTRCSWGARQHVPGVMVLYGGCLRGDIFSPIREAQAAGLKVVMLGMAG
ADPEQLRRLVPGMDSVQTFFAVDDGPSLDRAVSGLAAALCQASFTTQPRPEPCPVYCPKG
QKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPGSPGRPG
TPGTPGAPGLKGSPGLPGPRGEPGEQGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSG
PPGPRGPLGDPGPRGPPGLPGTSVKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGP
QGPIGPPGEKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEK
GERGPPGPAGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKG
EKGDVGPAGPRGATGVQGERGPPGLVLSGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGE
KGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGN
QGDPGADGQNGSPGPSGSKGDRGEPGPPGLPGRLVDTGPGAREKGEPGDRGQEGPRGPKG
DPGLPGAPGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPG
LNGAAGKAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDG
RKGEKGDSGAPGREGRDGPKGERGIPGILGPQGPPGLPGPLGPPGQGFPGVPGGTGPKGD
RGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKVSALREIVETWDESSGSFLPVP
ERRRGPKGDSGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAG
EPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGLPGPPGPKV
SVDGPGPALSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNLGL
PGERGVAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGP
PGRGLPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSP
GVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLMGEPGAKGDRGL
PGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGLPGPPGVKGDLGLP
GPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGAS
GLKGDKGDPGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAG
LKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDSGDPGDKGSKGEPGDKGSA
GSPGLRGLPGPQGQPGAAGIPGDPGSPGKDGVPGIRGGKGDVGFMGPRGLKGERGVKGAC
GVDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPK
GDQGEKGERGTPGIGGFPGPRGSDGSAGSPGPPGSVGPRGPEGLQGQKGERGPPGERVVG
APGAPGAPGERGEQGRPGPAGLRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSR
PLPSYAADTAGSQLHAVPVLRVSHAEEEAACKPTRMATVWHGTMGDHTFREDPEAPWDSD
DPCSLPLDEGSCTAYTLRWYHRAVPGGTEACHPFVYGGCGGNANRFGTREACERRCPPRV
AXSQGTGATQD
NT seq
8856 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggcttctggtggccgcgctctgcgccgggatcctggcaggggcgccccga
gtgcgagcccagcacagggagagagtgacctgcacgcgcctttacgccgctgatattgtg
ttcttactggatggctcctcatccattggccgcagcaatttccgcgaggtccgcagcttt
ctcgaagggctggtgctgcctttctctggagcagccagtgcacagggtgtgcgctttgcc
acagttcagtacagtgatgacccacggacagagttcagcctggatgcacttggctctggg
ggtgatgtgatccgcgccatccgtgagctcagctataaagggggcaacactcgcacaggg
gctgcaattctccatgtggctgaccgtgtcttcctgccccagctggcccgacctggtgtc
cccaaggtctgcatcctgatcacagatgggaagtcccaggacctggtggacacagctgcc
caaaagctgaaggggcagggagtcaatctgtttactgtggggatcaagaatgccgaccct
gaggagctgaagcgagttgcctcacagcccaccagtgacttcttcttcttcgtcaatgac
ttcagcatcttgaggacactactgcccctcgtttcgcggagagtgtgcacaactgctggt
ggcgtgcctgtgacccggcctccggatgactcaacctctgctccacgagacctagtgctg
tctgagccaagcagccaatccttgagagtacagtggacagcagccagtggccctgtgact
ggctacaaggtccagtatactcctctgacggggctgggacagccactgccgagtgagcgg
caggaggtgaacatcccagctggtgagaccagcgtgtggctgcagggtctccggccactg
actgagtaccaagtgactgtggttgccctctacgccaacagcatcggggaggcggtgagc
gggacagctcggaccactgccctggaggggccggaactgaccatccagaataccacagcc
cacagcctcctggtggcctggcggagtgtgtcaggtgccactggctaccatgtgacatgg
cgggtcctcagtggtgggcccacacagcagcaggagctgggccctgggcaaggttcagtg
ttgctgcgtgacttggagcctggcacggactatgaagtgaccatgagcaccctgtttggc
cacagtgtggggcccaccacttccctgacggctcgcactgatgcttctgttgagcagacc
ctgcgcccggtcatcctgggccccacatccatcctcctttcctggaacttggtgcctgag
gcccgtggctaccgcttggaatggcggcgtgagactggcttggagccaccacagaaggtg
gtgctgccctctgatgtaacccgctaccagttggatgggctgcagccgggcacagagtac
cgcctcacactctacactctgctggagggccgcgaggtggccacccctgcaaccgtggtt
cccactggaccagagctgcccgtgggccctgtgatggacctgcaagccaccgagctgccc
gggcagcgggtgcgagtgtcctggagcccagtccccagtgccacccagtaccgcatcatt
gtgcgcagcacccagggggttgagcggatcctggtgcttcccgggagtcagacagcgttc
gacttggatgacgttcaggctgggcttagctacactgtgcgggtgtctgctcgagtgggt
ccccgtgagggcagtgccagtgtcctcactgtccgccgggagccggaaaccccacttgct
gttccagggctgcgggttgtggtgtcagatgctacaagagtgagggtggcctggggaccc
atccctggagccagtggatttcggattagctggagcacaggcagtggtccagagtccagc
cagacactgcccccagactctactgtcacagacatcacagggctgcagcctggaaccacc
taccaggtggctgtgtctgtactgagagggagagaagagggccccgctgcggtcatcgtg
gctcgaacagacccactgggcccagtgaggacagtccatgtgactcaggccggcagctca
tctgtcaccattacctggaccagggttcctggcgccacaggatacagggtttcctggcac
tcagcccacggcccagagaaatcccagttggtttctggggaggccacggtggctgagctg
gacgggctggagccagatactgagtatacggtgcatgtaagggcccatgtggctggtgtg
gatgggccccctgcctctgtggttgtcaggactgcccctgagcctgtgggccgtgtgtca
aggctgcagatcctcaatgcttccagcgacgttctgcggatcacctgggtaggggtcact
ggggccacagcttacagactggcctggggccggagtgaaggtggccccatgagacaccag
atactcccaggaaacacagactctgcagagatccggggtcttgaaggtggagtcagctac
tcagtgcgagtgactgcacttgtcggggaccttgagggcacacctgtctccattgtcgtc
accacgccgcctgaggctccgccagccctgggaacgcttcacgtggtgcagcgcggggag
cactcgctgaggctgcgctgggagccggtgcccggagtgcagggcttccttctgcgctgg
caaccagagggtggccaagaacagtcccgggtcctggggcccgagctcaacagctatcac
ctggacgggctggagccagccacacagtaccgcgtgaggctgagtgtcctagggccggct
ggagaagggccctctgcagacgtgaaagcgcgcactgagtcacctcgtgttccaagcact
gaactacgtgtggtggacacctcgatcgactcagtgactttggcctggaccccagtgtcc
agggcatccagctacatcctatcctggcggccactcagaggccctggccaggtgcctggg
gccccgcagacacttccagggatctcaagctcccagcgggtgacagggctagagcctggc
gtctcttacatattctccctgacgcctgtcctggatggtgtgcagggtcctgaggcatcc
gtcacacagacgccagtgtgtccccgtggcctggcggatgtggtgttcctaccacatgcc
actcaagacaatgctcaccgtgcggaggctacgaggcgggtcctggagcgtctggtgtcg
gcacttgggcctcttgggccacaggcggttcaggttggcctgctgtcttacagtcaccgg
ccctccccactgttcccctgaatgggctcctatgaccttggcattatcttgcaaaggatc
ctgtgacatgcctacatggaccaagtgggaacaacctggggtttgacatgtccttccttc
cagcacgccgtggtcacagctcaccagatacgatgtggcaccagatgctcctggggcgca
cgccagcacgtgccaggggtgatggttctgtacggtggatgcttgagaggtgacatattc
agccccatccgtgaggcccaggctgctgggcttaaagtggtgatgttgggaatggctgga
gcagacccagagcagctgcgtcgcttggtgccgggcatggactctgtccagaccttcttc
gccgtggatgatgggccaagcctggaccgggcagtcagtggtctggccgcagccctgtgt
caggcatccttcactactcagccccggccagagccctgcccagtatattgtccaaagggc
cagaagggggaacctggagaaatgggcctgagaggacaagttgggcctcctggcgaccct
ggcctcccgggcaggactggtgctcctggcccccaggggccccctggaagtgccattgct
aagggcgaaaggggcttccctggagcagatgggcgtccaggcagccctggccgccccggg
actcctgggacccctggagcccctggcctaaagggctctccagggttgcctggccctcgt
ggggaaccgggagagcaaggacctcgaggcccaaagggggagccgggggctcctggacaa
gtcattggaggcgaaggacctgggcttcctgggcggaaaggggaccctggaccatcgggc
ccccctggacctcgtggaccactgggggacccaggaccccgtggccccccagggcttcct
ggaacatccgtgaagggtgacaaaggtgatcgtggggagcggggtccccctggaccaggt
gaaggtggcattgctcctggggagcccgggctgccgggtcttcccggaagccctggaccc
caaggccccattggcccccctggagagaaaggagaaaaaggtgactctgaggatggagct
ccaggcctcccaggacaacctgggtctccgggtgagcagggcccacggggacctcctgga
gctattggccccaaaggtgaccggggctttccagggcccctgggtgaggctggagagaag
ggcgaacgtggacccccaggcccagcgggatcccgggggctgccaggggttgctggacgt
cctggagcagagggtcctgaagggccaccaggacctaccggccgccaaggagagaagggg
gagcctggtcgtcctggggaccctgcagtggtgggacctgctgtcgctggacccaaagga
gaaaagggagatgtggggcctgctgggcccagaggagctaccggagtccaaggggaacgg
ggcccacctggcttggttctttctggagaccctggccccaagggagaccctggagaccgg
ggtcccattggccttactggcagagcaggacccccaggtgactcagggcctcctggagag
aagggagaccctgggcggcctggccccccaggacctgttggcccccgaggacgagatggt
gaagttggagagaaaggtgacgagggtcctccgggtgacccaggtttgcctggaaaagca
ggcgaacgtggccttcggggggcacctggagttcggggacctgtgggtgagaagggaaac
cagggagatcctggagcggatggacaaaatggcagccctggaccatctggatccaagggt
gaccgtggggagccgggtcccccaggactcccgggacggctggtagacacaggacctggg
gcaagagagaagggagagcctggggaccgtggacaagaaggtcctcgagggcccaagggt
gaccctggcctccctggagcccctggggataggggcatagatgggcttcgcgggccccca
ggcccacagggggacccaggtgtccgaggcccagcaggagaaaagggtgaccggggtccc
cctgggctggatggccggagcggactggatgggaaaccaggagcctccgggccccctggg
ctgaatggtgctgcaggcaaagctggggacccagggagagacgggcttccaggcctccgt
ggagaacagggcccccctggcccctctggtccccctggattactgggaaagccaggcgag
gatggcaaacctggcctgaatggaaaaaacggagaacctggggaccctggagaagacggg
aggaagggagagaaaggagattcaggtgcccctgggagagaaggtcgtgatggccccaag
ggtgagcgtggcattcctggtatccttggaccccagggccctccaggcctcccagggcca
ctgggccctcctggccagggttttcctggtgttccaggaggcacgggccccaagggtgac
cgtggggagactggatccaaaggggagcagggcctccctggagagcgtggcctgcgagga
gagcctggaagtgtgccgaacgtggatcggttgctggaaactgctggcatcaaggtgtct
gccctgcgggagatcgtggagacctgggatgagagctccggtagcttcctgcctgtgccc
gaacggcgtcgaggccccaagggggactcaggcgagcggggctccccaggcaaggagggc
cccatcggctttcctggagaacgcgggctgaagggagaccgtggagaccctggccctcag
gggccacctggcctggcccttggggaaaggggcccccctggacctcccggccttgccggg
gagcctggaaagcctggtattcctgggctcccaggcagggctgggggtgtgggagaggca
ggaaggccaggagagaggggagaacggggagagaaaggagaacgtggagaacagggcaga
gatggccctcctggcctccctggaacccctgggctccctggaccccctggccccaaggtg
tctgtggatgggccaggtcctgcactctctggagaacagggaccccctggactcaagggt
gctaagggggagccgggcagcgatggtgaccgaggtcccaaaggagacaggggtgtgcca
ggcatcaaaggagaccggggagagcctggaccgaggggccaggatggcaacctgggtcta
ccaggagagcgtggcgtggctgggcctgaagggaagccgggtctgcagggtccaagagga
ccccctggcccagtgggtggtcatggagaccctggaccacctggtgccccgggtcttgct
ggccctgcaggaccccagggaccctctggcctgaagggggagcctggagagacaggaccc
ccaggacggggcctgcctggacctactggagctgtgggacttcctggtccccctgggcct
tcgggccttgtgggtccacaggggtctccaggtttgcctggacaagtgggggagacaggg
aagccgggagccccaggtcgagatggtgccggtggaaaagatggagacagagggagccct
ggtgtgccagggtcaccaggtctgcccggccctgtcggacctaaaggagaacctggcccc
acgggggcccctggacaggctgtggtcgggctccctggagcaaagggagagaagggagcc
cctggaggccttgctggagacctgatgggtgagccgggagccaaaggtgaccgaggactg
ccagggccgcgaggcgagaagggtgaagctggccgtgcaggggagcccggagaccctggg
gaagatggtcagaaaggggctccaggacccaaaggtttcaagggtgacccaggagttggg
gtcccaggctcccccgggctgcctggccctccaggtgtgaagggagatctgggcctccct
ggcccccctggtgctcctggtgttgttgggttcccgggtcagacaggccctcgaggagag
atgggtcagccaggccctagcggagagcggggtctggcaggccccccagggagagaagga
gttccaggccccttggggccacctggaccaccggggtcagtgggaccacctggggcctct
ggactcaaaggagacaagggagaccctggagcagggctgcccgggccccgaggcgagcgt
ggggagccaggcgtccggggtgaagatggccgccctggccaggagggaccccgaggactc
acggggccccctggcagcagaggagagcgtggggagaagggtgatgttgggactgcagga
ctaaagggcgacaagggagactccgctgtgatcctggggcctccagggccacggggtgcc
aagggggacatgggcgaacgagggcctcggggcttggatggtgacaaaggacctcgggga
gacagtggggaccctggtgacaagggcagcaagggagagcctggtgacaagggctcggct
gggtcgccaggactgcgtgggctcccaggaccccagggtcaacctggtgcagcagggatc
cctggtgacccgggctccccaggaaaggatggagtgcctggcatccgaggaggaaaagga
gatgttggcttcatgggtccccggggcctcaagggtgaacggggagtgaagggagcctgt
ggcgttgatggagagaagggagacaagggagaagctggtcccccaggccgccccgggctg
gcaggacacaaaggagagatgggggagcctggtgtgccgggccagtcgggggcccctggc
aaggagggcctgatcggtcccaagggtgaccgaggctttgatgggcagccaggccccaag
ggtgaccagggcgagaaaggggagcggggaaccccaggaattgggggcttcccaggcccc
aggggcagtgatggctctgctggttccccggggccacctggcagtgttggtcccagaggc
cctgaaggacttcagggccagaagggtgagcgaggtccccctggagagagagtggtgggg
gctcctggggcccctggagcccctggcgagagaggggagcaggggcggccagggcctgct
ggcctccgaggcgagaagggagaagctgcactgacggaggatgacatccggggctttgtg
cgccaggagatgagtcagcactgtgcctgccagggccagttcatcgcatccggatcacga
cccctccctagttatgctgcagacactgccggctcccagctccatgctgtgcctgtgctc
cgagtctctcatgcagaggaggaagctgcatgcaagcccacacgcatggccactgtgtgg
cacgggacaatgggagatcatactttccgtgaggaccctgaagccccttgggatagcgat
gacccctgttccctgccactggatgagggctcctgtactgcctacaccctgcgctggtac
catcgggctgtgccaggtggcacagaggcctgtcacccttttgtctatggcggctgtgga
gggaatgccaaccgttttgggacccgtgaggcctgtgagcgccgctgcccaccccgagtg
gcctagagccaggggacaggtgctacccaggactga
DBGET
integrated database retrieval system
