Rhinopithecus bieti (black snub-nosed monkey): 108536531
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Entry
108536531 CDS
T04641
Name
(RefSeq) vacuolar protein sorting-associated protein 13B isoform X1
KO
K19526
vacuolar protein sorting-associated protein 13B
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rbb04131
]
108536531
Membrane trafficking [BR:
rbb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108536531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_DH-like
VPS13_VAB
ATG2-VPS13_C
Motif
Other DBs
NCBI-GeneID:
108536531
NCBI-ProteinID:
XP_017738850
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MSNTMVNKDDLPVSKYYRGKLSKPKVHGDGVQKISAQENMWRAVSCFQKISVQTTQIVIS
METVPHTSKPCLLASLSNLNGSLSVKAAQKVPGIILGSSFLLTINDFLLKTSLKERSRIL
IGPCCATANLEAKWCKHSGNPGPEQSIPKISIDLRGGLLQVFWGQEHLNCLVLLHELLNG
YLNEAGNFEVQVSEPVPQMSSPVEKNQTFKSEQTSDDLRTGLFQYVQDAEYLKLPGVYEV
LFYNETEDCPGMMLWRYPEPRVLTLVRITPVPFNTTEDPDISTADLGDVLQVPCSLEYWD
ELQKVFVAFREFSLSESKVCELQLPDVNLVNDQKTLVSSDLWRIVLNSSQNGADDQSSTS
ESGSQSTCDPLVTPTALAACTRVDSCFTPWFVPSLCVSFQFAHLEFHLCHHLDQLGTAAP
QYLQPFVSDRNMPSELEYMIVSFREPHIYLRQWNNGCVCQEIQFSAQADCKLLECRNVTM
QSVVKPFSIFGQMAVSSDVVEKLLDCTVIVDSVFVNVGQHVVHSLNTAIQAWQQNKCPEV
EELVFSHFVICNDTQETLRFGQVDTDENILLASLHSHQYSWRSHKSPQLLHICIEGWGNW
RWSEPFSVDHAGTFIRTIQYRGRTASLIIKVQRLNGVQKQIIICGRQIICSYLSQSIELK
VVQHYIGQDGQAVVREHFDCLTAKQKLPSYILENNELTELCVKAKGDEDWSRDVRLDSKA
PEYSIVIQVPSSNSSIIYVWCTVLTLEPNSQVQQRMIVFSPLFIMKSHLPDPIIIHLEKR
SLGLSETQIIPGKGQEKPLQNIEPDLVHHLTFQAREEYDPSDCAVPISTSLIKQIATKVH
PRGTVNQILDEFYGPEKSLQPIWPYNKKDSDRNEQLSQWDSPMRVKLSIWKPYVRTLLIE
LLPWALLINESKWDLWLFEGEKIVLQVPAGKIIIPPNFQEAFQIGIYWANTNTVHKSVAI
KLVHNLTSPKWKDGGNGEVVTLDEEAFVDTEVRLGAFPGHQKLCQFCISSMVQQGIQIIQ
IEDKTTIINNTPYQIFYKPQLSVSSPHSGKEYFHVPDSATFSICPGGEQPAMKSSSLPCW
DLMPAISQSVLDASLLQKQIMLSFSPAPGADSSQCWSLPAIVRPEFPRQSVAVPLGNLRE
NGFCTRAIVLTYQEHLGVTYLTLSEDPSPRVIIHNRCPVTVLIKENIKDIPKFEVYYKKI
PSECSIHHELYHQISSYPDCKTKDLLPSLLLRVELLDEVTTEWSDAIDINSQGTQVVFLT
GFGYVYVDTVHQCGTVFITVAPEGKAGPILTNSNRAQEKIVTFKMFITQLSLAVFDDLTH
HKASPELLRLTLDNVFLCMAPGAGPLPGEEPAAALFELYCVEICCGDLQLDNQLYNKSNF
HFAVLVCQGEKAEPIQCSKMQSLLISNKELEEYKENCFIKLRITLNEGKSILCDINEFSF
ELKPARLYVEDTFVYYIKTLFDTYLPNSRLAGHSTHLSGGKQMLPVQVTQHARALVNPVK
LRKLVIQPVNLLVSIHASLKLYIASDHTPLSFSVFERGPIFTTARQLVHALAMHYAAGAL
FRAGWVVGSLEILGSPASLVRSIGNGVADFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHI
SKGTLTSITNLATSLARNMDRLSLDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLG
AIAGIVDQPMQNFQKTSEAHASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGI
LHGAGLSQLPKQRYQPSDLHADQAPNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEH
EGCLLLTSEVLFVVSVSEDTQQQAFPVTEIDCAQDSKQNSLLTVQLKQPRVACDVEVDGV
RERLSEQQYNRLVDYITKTSCHLAPSCSSMQIPCPVVAAEPPPSTVKTYHYLVDPHFAQV
FLSKFTMVKNKALRKGFP
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccatggtgaataaggatgatcttccagtctccaaatattaccgtggaaag
ttgtctaaacccaaagttcatggtgatggagtgcaaaagatttcagctcaagaaaacatg
tggagagctgtttcctgctttcaaaaaatttctgttcaaactactcagattgtgatctcc
atggaaactgtaccccataccagtaaaccatgcctgttagcatctctctcaaacctcaat
ggaagccttagtgtcaaagcagcacaaaaagtacctggcataattcttggatcatcattt
ctactcactataaacgattttctccttaaaacaagtctcaaagaaagaagccgcattctg
ataggaccatgttgtgctactgccaatctggaagctaaatggtgtaaacacagcggcaat
ccaggcccggagcaatccataccaaaaatatccattgacttaagaggaggtctgctacag
gtcttctggggtcaagaacatttgaattgtttagttcttctacatgaattactcaatgga
taccttaatgaggcgggaaattttgaagtacaagtttctgaaccagtacctcaaatgtca
tctcctgtggaaaagaatcagacatttaaaagtgaacaaacttcagatgacctacggaca
ggtctatttcaatatgtacaggatgctgaatatttgaaattgcctggggtctatgaagtc
ttattttataatgaaactgaagattgcccagggatgatgttatggagatacccagaacct
agagtgctcacccttgtacgaataactcctgtgccttttaacaccacagaggatccagat
attagcacagcagaccttggtgatgtgctacaggttccttgtagcttggaatactgggat
gaactccagaaggtttttgttgcatttagagaatttagtctgtctgaaagcaaagtttgt
gaactgcagttgccggatgtcaatcttgtgaatgaccagaagacattagtatcttcagat
ctttggagaattgtcttgaacagcagtcagaatggagctgatgaccaaagctctacaagt
gagtctggttctcaaagcacttgtgatccacttgtgactccaacagccttggctgcctgt
accagagttgactcctgctttaccccatggtttgtcccatccctttgcgtttccttccag
tttgctcacctggaatttcatctttgtcatcaccttgaccaactaggcacagctgcacca
cagtacctacagccatttgtttctgatagaaatatgccatctgaactagaatacatgatt
gtttccttcagagaaccacacatatatcttcgacagtggaataatggttgtgtctgtcag
gagatccagttctcagctcaagcagactgtaaacttctagagtgcagaaatgtcactatg
caaagtgtggtgaaaccgttcagcatcttcgggcagatggcagtttccagcgatgtagta
gaaaagctgcttgactgcaccgtgatagttgattctgtgtttgtaaacgttggacagcat
gtagtccattctctaaacactgcaatacaagcttggcaacagaacaaatgccctgaggta
gaggagttggtcttcagccattttgtgatctgtaatgacacacaggagacactgcggttt
ggccaggtggatactgatgaaaatattctgctggcgagtctccacagtcaccagtacagc
tggcgctctcacaaatccccacagctgttacacatctgtattgaaggttggggcaactgg
cgttggtcagagcctttcagtgtggaccatgccgggacttttattagaacaattcagtac
aggggtcgaactgcttctctcatcatcaaggttcagcgactcaatggagtacaaaaacag
attatcatctgtggaagacagatcatctgtagttacttgtctcaaagcatagaactaaaa
gttgttcagcattacattggtcaagatggacaagctgtagttcgggaacattttgactgc
ctcacagccaaacagaaactgccttcatatatactagaaaacaatgaactgacagagctg
tgtgtgaaggccaaaggagatgaagactggtcaagagatgtgcgcctggactccaaagcc
cctgaatacagcattgtcattcaggtgccatcttcaaacagttccattatttatgtctgg
tgcacagttttgactttagaacccaactctcaagtgcaacaacgaatgattgtgttcagc
cctctttttatcatgaagagtcatcttccagaccccattatcatacatttggagaaaagg
agtctgggattgagtgaaacacaaattattccaggaaaagggcaggaaaaaccactgcaa
aacatagaacctgaccttgtacatcacctgacattccaagcaagagaagaatatgatcct
tcagattgtgcagttcccatctcaacatccctcattaagcaaatagccactaaggtacac
cctagaggcacagttaatcagatccttgacgaattctatgggccagaaaagtcgcttcaa
cccatatggccctataataagaaggattctgacaggaatgaacagctaagtcagtgggat
agcccaatgcgagtgaagctgtcaatctggaagccatatgttagaactttgttgatagaa
cttctgccctgggccctgcttatcaatgagtctaaatgggacctctggctatttgaagga
gagaaaattgttctacaggttcctgctggcaaaattattattcctcctaattttcaggaa
gcttttcaaattggaatatactgggcaaatacaaacactgtgcacaagtcagtagcaatt
aaactggtccataacctgacatctccaaagtggaaagatggaggtaatggtgaagttgtg
acattggatgaagaagcatttgttgatactgaagtaagacttggtgcttttccaggacat
cagaagttatgtcagttctgcatttcctccatggtacagcaaggtatacaaattattcag
attgaagacaagactacaataatcaataatacaccatatcaaatattttataaaccacag
ctatctgtctccagtccccattctggaaaggagtattttcatgttccagacagtgctact
tttagcatttgcccaggtggagagcagcctgctatgaaatccagctcccttccttgctgg
gacttgatgcctgccatcagtcagtcagtgctggatgcatccctgcttcagaaacagatc
atgctgagcttttctcctgccccaggtgctgacagctcacagtgctggagcctgccagct
atagttagaccagagtttcccagacagagtgtggcagtaccccttgggaatttacgggaa
aatggattctgtaccagggctatagtgctgacatatcaagaacaccttggagtgacttac
ttaaccctctcagaagaccctagtcctcgagtaattatccacaacagatgtccagtaaca
gtgcttataaaggaaaacattaaagatattccaaagtttgaggtttattacaaaaaaatt
ccctccgagtgctcaattcatcatgagctgtatcatcagatttccagttatccagactgc
aagaccaaagacttacttccgagcctccttttgagagttgaactgctagatgaagtaaca
actgagtggagtgatgccatcgacatcaacagtcagggaacacaggttgtgttcctgact
ggctttggctatgtgtatgtggacactgtacatcagtgtggcacagtcttcatcactgtg
gccccggaaggaaaagcaggacctattttaactaacagcaatagagcccaggagaagatt
gttacattcaaaatgtttatcactcagttgagtctggcagtgtttgatgacctcacccac
cacaaagcatcacctgagcttctgagactcacactggacaatgtttttctctgcatggcc
ccgggagctggtcccctccctggggaagaacctgcggctgcgttgtttgaactttactgt
gtggagatctgctgtggggacctgcagctagacaaccagctttataacaagtccaatttc
cactttgctgtcttagtctgccagggagaaaaagcagaacccattcagtgttctaaaatg
cagagtctcctcatatctaacaaagagctggaagaatacaaggaaaactgttttatcaaa
cttcgcatcaccttaaatgaaggcaagagcatcctctgtgatattaacgagttcagcttt
gaattaaaacctgctcggttgtatgtggaagacacatttgtatactacatcaagactttg
tttgacacttaccttcctaacagcaggttggctggtcactccacgcacctctctgggggt
aaacagatgttgcccgtgcaggtcacacagcacgccagggccttggtgaatcctgtgaag
ttacggaaactggtgatccagccagtgaatttgctcgtcagcatccatgcttccctcaag
ctgtacatagcctcagaccacactcctctctccttctcggtgtttgaaaggggacctatc
ttcaccactgcgaggcagcttgtgcacgccctggcaatgcactatgccgccggggccctt
ttcagagcaggctgggtagttgggtctctggagattcttggcagccctgcaagcctggta
agaagcatcgggaacggcgtcgccgacttcttcaggcttccgtacgaggggctgacccgg
ggccccggagccttcgtgagtggcgtctccagagggaccacatcgtttgtaaagcacatc
tccaaaggtaccctcacatccatcaccaacctggccacaagcctggcccggaacatggac
cggctctcactggatgaggagcactacaaccggcaggaggagtggcggcggcagctcccc
gagagcctgggcgaggggcttcgacagggcctgtcccggctgggcatcagcctgcttggt
gcaatcgctggtatagtcgatcagccgatgcagaacttccagaaaacatctgaggcacat
gcttcagcaggacacaaggccaagggtgtcatctcaggtgtggggaaaggaatcatgggg
gtgttcacaaagcccatcggaggagctgctgagctggtgtcacagactggttacggtatt
ttacatggagctggactttctcagcttcccaaacagcgctatcagccaagtgatctacat
gctgaccaggctccaaacagccatgtcaaatatgtctggaaaatgcttcagtctctgggc
agaccagaagtccacatggccctggatgtggttttggtgaggggctcaggccaggagcat
gaagggtgcttgctgctgacatcagaagtgctcttcgtggtgagtgtcagtgaggacaca
cagcagcaggctttccccgtcacagaaatcgactgtgcacaggacagcaagcagaacagc
ctactcacagtgcagctgaagcagccaagagtggcctgtgatgtggaggtagatggagtc
cgagagagactgtcagagcaacagtacaacagacttgtggactacatcacaaagacatct
tgtcacctagcccctagctgttcttccatgcaaataccatgccctgtggtggctgccgaa
cctcccccctccactgttaaaacataccattacttggttgatccgcattttgctcaggtc
ttccttagtaaatttaccatggtgaaaaataaagccctgaggaaagggtttccttga
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