Rhodocyclaceae bacterium Thauera-like: B4966_02205
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Entry
B4966_02205 CDS
T05394
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B4966_02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbh03021
]
B4966_02205
03400 DNA repair and recombination proteins [BR:
rbh03400
]
B4966_02205
Enzymes [BR:
rbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B4966_02205
Transcription machinery [BR:
rbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B4966_02205
DNA repair and recombination proteins [BR:
rbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B4966_02205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
FH2
Motif
Other DBs
NCBI-ProteinID:
AUL99118
UniProt:
A0A2K9LCB7
LinkDB
All DBs
Position
475499..479632
Genome browser
AA seq
1377 aa
AA seq
DB search
MAYSYTEKKRIRKSFAKRKAVLDVPFLLATQIESFAAFLQADTPPELRVNQGLQAAFTSI
FPISSHSGNARLEFVQYMLGEPPFDVKECQQRGLTFASPLRARVRLVIMDRDAPKETIKE
VKEQEVYMGEIPLMTNTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDYLYFRVDRRRKMPVTILLRAIGMTPEEILETFHDFDDFHLSGES
VLFSVVPERLRGEVARFDITAPDGRLIVARDKRITAKHIRELDQAGVSRLAVPEEFLLGR
ILARNVVDPETGELVARANDEITEELLAKLRDAGVRDIQTLYVNDLDRGAYISQTLRIDE
TSDQWAAKVAIYRMMRPGEPPTEEAVEALFHGLFYSEERYDLSAVGRMKFNRRAYPEKID
DKAPDWLKRFYQRVGPQGEEGAGTLSNDDILAVIGVLVELRNGRGDIDDIDHLGNRRVRS
VGELAENQFRAGLVRVERAVKERLSQAESENLMPHDLINAKPISAAIKEFFGSSQLSQFM
DQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL
AVYARTNRYGFLETPYRKVIDGKVTDQIDFLSAIEEGQYVIAQANAEVAEDGTLAGELVS
CRHKGEFTLATADQVQYMDVAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRP
EKPLVGTGIERTVAVDSGTAVQALRGGVVDYVDANRIVVRVNDDENVAGQVGVDIYNLIK
YSRSNQNTNINQRPIVKVGDVISKGDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDS
ILISERVVAEDRFTSIHIEELTVVARDTKLGPEEITRDIASLGEAQLSRLDESGIVYIGA
EVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPAGMVGTVIDVQVFT
REGIERDKRAQSIIDDMLRSFKTDLADQMRIVERDAFARLRRQLVGQKANGGPKKLAKGS
EITDAYLDQLEPYHWFDIRVADEELAAQLEAVREGLEKTRKDFDHAFEIKKKKLTQGDEL
PPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRIVPVEDMPYMEDGTPVDIVLNPLG
VPSRMNIGQILETHLGWAAKGLGQKIDRMLRANAAVQEVRSLLEQIYNESGTPENIAALA
DDEVLELAGNLTQGVPFASPVFDGAKEEEISKMLALAGLPESGQVTLYDGRTGEPFERKV
TVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVTGRTKVYENIVKGDHKIDAGMPESFNVLVKEIRSLAIDIDLDRY
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcctacaccgaaaagaagcgtatccgcaagagcttcgccaagcgcaaggcc
gtgctggatgtgcctttcctgctcgctacccagatcgagtcgttcgcggccttcttgcag
gctgacacgccaccggagttgcgcgtgaatcagggtctgcaggccgcgttcacgtcgatc
ttcccgatctccagccatagcggcaacgcccggctcgagttcgtccagtacatgctcggc
gaaccgccgttcgacgtgaaggagtgtcagcaacgcggcttgacctttgcctcgccgctg
cgtgcgcgtgtgcgcctggtcatcatggaccgcgatgcgcccaaggagaccatcaaggag
gtcaaagagcaggaggtgtacatgggcgaaatcccgctcatgaccaacaccggctccttt
gtcatcaatggcaccgagcgtgtcatcgtctcccaattgcatcgctcgcccggggtgttc
ttcgagcatgaccgcggcaagacgcattcgtcgggcaagctgctgttttccgcgcgcatc
atcccttaccgtggctcctggctcgattttgagttcgatcccaaggattatctgtacttc
cgggtggaccgtcggcgcaagatgccggtcaccatcctgctgcgcgcaatcgggatgacg
ccggaggagatcctcgaaaccttccacgacttcgacgatttccatttgtcgggtgagtcg
gtgttgttctcggtggtgcccgagcggctgcgcggtgaagtagcgcgtttcgacatcacc
gcgccggatggtcgtctgatcgtggcgcgcgacaagcgcatcaccgccaaacacatccgt
gagctggatcaagccggggtgagccggctggcggtgcccgaggagttcctcctagggcgc
atcctggcgcgcaatgttgtcgatcccgaaaccggtgagctggttgcgcgggctaacgat
gaaatcaccgaagagctcctcgccaagctgcgcgacgccggggtgcgcgacatccagact
ttgtatgtgaacgacctcgatcgcggggcttatatctcgcagacgttgcggattgatgag
acctccgaccagtgggcggcgaaggttgccatttaccgcatgatgcgtccgggcgagccg
ccgaccgaagaagcggtcgaggcgttgttccacgggttgttctactccgaggagcgctac
gacctgtccgccgtgggccggatgaaattcaatcgccgcgcttacccggaaaaaatcgac
gacaaggctcccgattggctcaagcgcttctaccagcgggtgggcccgcaaggcgaagag
ggcgcaggcacgctgtcgaacgatgacatcctggcggtcatcggggtgctggtcgagctg
cgcaatggccgcggcgacatcgatgatatcgatcacctgggcaaccgccgggtgcgttcg
gtgggcgagctggccgaaaatcaattccgcgccggtctggtgcgggtggagcgcgcggtc
aaggagcgcctgtcccaggccgaatcggaaaatctgatgccgcatgatctgatcaacgcc
aaaccgatttcggccgcgatcaaggagttctttggctctagccagctctcccagttcatg
gatcagaccaacccgctgtccgagatcacccacaagcgtcgggtgtcggcgctcggtccg
ggcggtttgacccgcgagcgcgccggcttcgaggtgcgcgacgtgcatccgacccactac
gggcgtgtgtgtccgatcgagacgccggaaggcccgaacattggcctgatcaactcgttg
gcggtctatgcccgcaccaaccgctatggctttttggaaacgccgtatcggaaagtgatc
gatggcaaggtcaccgaccagatcgatttcctgtcggccatcgaagaagggcagtacgtg
atcgctcaggccaatgccgaggtggccgaagacggcacactggccggtgaattggtgtcc
tgccgccacaagggtgaattcaccttggccacggccgatcaggttcagtacatggacgtg
gcgccggggcagatcgtttcggtggcggcctcgctgattcccttcctggaacacgatgac
gccaaccgcgcgctgatgggcgccaacatgcagcgccaggcggtgccttgtctgcgtccg
gaaaagccactggtcggcaccggcatcgagcgcaccgtggcggtcgactccgggaccgcg
gtgcaggcgctgcgcggcggcgtggtggactatgtagacgccaaccgtatcgtggttcgg
gtcaacgacgatgaaaacgtcgctggccaggtcggcgtggatatctacaacctgatcaag
tactcccgttccaaccaaaacaccaatatcaaccagcgtccgatcgtcaaagttggtgat
gtgatcagcaagggcgacgtgattgccgatggggcctcgaccgatctgggtgagttggcg
ctcggccagaacatgctggtggcgttcatgccttggaacggctacaacttcgaggactcc
atcctgatttccgagcgggtggtggctgaagaccggttcacttcgatccatatcgaagag
ctgaccgtggtcgcccgcgacaccaagctcggacccgaggaaatcacccgcgacatcgct
tcgctcggcgaagcccagctttcccgcctggatgaatccggcattgtgtatatcggtgcc
gaagtcgaagccggtgacgtgctggtgggcaaggttacgcccaagggcgaaacccagctt
accccggaggaaaagctgttgcgcgcgatcttcggcgaaaaggcgtccgacgtgaaggac
acttcgttgcgggtgcccgccggcatggtcggtaccgtgatcgacgtgcaggtatttacc
cgcgaaggtatcgagcgcgacaagcgtgcccagtcgatcatcgacgacatgctgcgcagc
ttcaagaccgatctggccgaccagatgcgcatcgtcgaacgcgacgcctttgcccgtctg
cgccgtcaactggtcgggcaaaaggccaatggcggtccgaagaaactcgccaaaggcagc
gagatcaccgacgcttatctcgaccagctcgaaccctatcactggttcgacattcgcgtg
gccgatgaagaactggccgcgcagctcgaggcggtgcgcgaaggtctggaaaagactcgt
aaggacttcgatcacgccttcgagatcaagaagaaaaagctcacccaaggcgacgagttg
cccccgggtgtgcagaagatggtcaaggtctacctcgcggtcaaacgtcgcctgcagccc
ggcgacaaaatggccggccgccatggcaacaaaggggtggtgtcgcggatcgtaccggtc
gaggatatgccgtacatggaagacggcactccggtcgatatcgtgctcaacccgcttggt
gtgccctcgcgtatgaacatcggccagattctggagacccatctgggttgggcggccaag
ggcctggggcagaaaatcgaccgcatgttgcgcgccaacgccgcggtgcaggaggtgcgc
agcctgttggagcagatctacaacgagagcggtaccccggaaaacatcgcggcgctggcc
gacgacgaagtgctcgagctggccggcaacctgacccaaggcgtgccttttgcctcgccg
gtgttcgatggtgccaaggaagaagagatcagcaagatgctggcgctggcggggctgccg
gagagcgggcaggtgacgctctatgacggacgcactggcgaaccgttcgagcgcaaggtc
actgtgggctacaagcatgtgctgaagctgcaccatttggtcgatgacaagatgcatgcg
cgctccaccggtccgtactccttggtgacccagcagccgttgggcggcaaggcgcagttt
ggcggccagcgcttcggtgagatggaagtctgggcgctggaagcctacggtgcagcctat
acgctgcaggaaatgctcaccgtcaagtcggacgacgtgaccgggcggaccaaggtgtat
gagaacatcgtcaagggcgaccacaagatcgatgccggcatgcccgagtcgttcaacgtg
ctggtgaaggaaattcgctcgctggcgatcgatatcgacctggaccgctactaa
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integrated database retrieval system
