Fuscovulum blasticum: B6K69_11395
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Entry
B6K69_11395 CDS
T05669
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rbl
Fuscovulum blasticum
Pathway
rbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B6K69_11395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbl03019
]
B6K69_11395
03400 DNA repair and recombination proteins [BR:
rbl03400
]
B6K69_11395
Enzymes [BR:
rbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B6K69_11395
Messenger RNA biogenesis [BR:
rbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B6K69_11395
DNA repair and recombination proteins [BR:
rbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B6K69_11395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWD22208
LinkDB
All DBs
Position
2336557..2338593
Genome browser
AA seq
678 aa
AA seq
DB search
MPEPATLLARVFGFPGFRPGQEEIVQSVLAGRNTLAIMPTGGGKSLCFQLPALCRDGVTV
VISPLIALMRDQVRSLREAGVEAGALTSGNTEDETEEVFSAIDEGRLKLLYIAPERLASP
ATLPLLRRAGVSLIAVDEAHCVSQWGHDFRPDYLRIGDLRLALNVPLAAFTATADEETRA
EIVTRLFNGAAPATFLRGFDRPNIHLAFAAKDSPRDQILRFAAARKGQSGIVYCGTRAKT
ETLAQALCEAGHHALAYHAGLDPDRRRFVETRFQRDDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIESYYQEIGRAGRDGAPAETLTLYGADDIRFRRQQIDESAAPLERKQADHGRL
NTLLGLAEAIGCRRQVLLGYFGEAAEPCGNCDLCDRPAEVFDATEAVRKALSAVLRTGES
FGAGHLIDILTGSLTDKVRDRGHDALPTFGVGRELSKTQWTALFRQMMGRDLVRPDPERH
GALRMTDAARPVLRGEVQMLFRKDAAPAAKAMVRSLVAEEDAPLLSALKAKRRALAEAAG
VPAYVIFADRTLIEMAEKRPQTLDDMAGITGVGAKKLESFGRLFLEVIAGAAEPLHPARM
ALAGRPEGAVFDRLAEVQARLQRGEDGTEKPLSCSWSTLRQIAERRPRTLAELERVQGMG
PLKAERFGAAFLDVLQDG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacctgccacgcttctggcccgggttttcggatttccggggttccgccccggt
caggaagaaattgtccagtctgtccttgccgggcgcaacacgctggccatcatgcccacc
ggcggcggcaagtcgctgtgtttccagcttccggccctgtgccgcgacggggtgacggtt
gtgatctcgccgctcatcgccctgatgcgcgatcaggttcgcagccttcgcgaggccggg
gttgaggcgggcgccctgacatcgggcaataccgaggatgagacggaagaggtgttctcg
gccatcgacgaaggccgtctcaagctgctctatatcgcgccggaacggctggcctcgccg
gcaaccctgccgcttttgcgccgcgccggtgtgtcgctgatcgcggtggatgaggcgcat
tgcgtttcgcaatggggccacgatttccgccccgattatctgcggatcggcgatctgcgc
cttgcgctgaacgtgccgctggccgccttcaccgcgacggcagacgaagaaacccgggcc
gagatcgtgacccgcctgttcaacggtgcggccccggccaccttcctgcgcgggtttgac
cggccgaacatccatctggcctttgccgcgaaagacagcccgcgcgaccagatcctgcgc
tttgccgccgcccgcaaggggcagtcgggcattgtctattgcggcacccgcgccaagacg
gaaacgctggcgcaggcgctgtgcgaggccggtcatcacgcgctggcctatcacgccggg
cttgacccggaccgccggcgctttgttgaaacccggttccagcgcgatgacgggctgatc
gtggtggcaacggtggccttcggcatgggcatcgacaagcccgacatccgctgggtcgcc
catgccgacctgcccaaatccatcgaatcctattatcaggaaatcggccgtgccggccgt
gacggggcgcccgccgaaacgctgacgctttacggcgcggacgacatccgtttccgtcgc
cagcagatcgacgaaagcgccgccccgctggaacgcaagcaggccgatcacgggcggctg
aacacccttctcggtctggccgaagcgatcggttgccgccggcaggtcttgctgggctat
ttcggcgaagccgccgagccttgcggcaattgcgatctgtgtgaccgcccggccgaggtg
ttcgacgccaccgaagccgtccgaaaggcgttgtccgccgtgttgcgcaccggcgaaagt
tttggcgcgggccacctgatcgacatcctgaccggtagcctgaccgacaaggttcgcgac
cggggccatgatgccctgcccacctttggcgtcgggcgcgagctgtccaaaacgcaatgg
accgcgctgttccgccagatgatgggccgcgatctggtgcggcccgatcccgaacgccat
ggcgcgctgcggatgacagacgccgcccgccccgtgctgcggggcgaggtgcagatgctg
ttccgcaaggatgcggcgcccgcggcaaaggcgatggtccgttcgctggtggccgaggaa
gacgcgccgctgctgtccgcgctcaaggccaagcgccgcgccctggccgaggcggcgggt
gttccggcctatgtcatctttgccgaccgcacgctgattgaaatggccgaaaagcggccg
cagacgctggacgatatggccgggatcaccggcgttggcgcgaagaagctggaaagtttc
ggccggctgttccttgaggtgatcgccggcgccgccgaaccgctgcacccggcccggatg
gcgctggcaggccggcccgaaggcgccgtcttcgaccggctggccgaagttcaggcccgc
ctgcaacgcggtgaagatggcacggaaaagccgctgtcctgctcttggtccaccctgcgc
cagatcgccgaacgtcgcccgcgcacgctggcggaactggagcgggtgcaggggatgggc
ccgctcaaggcggaacgcttcggcgcggcttttcttgatgtgttgcaggacggctga
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