Rubrivivax benzoatilyticus: RBXJA2T_07165
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Entry
RBXJA2T_07165 CDS
T04092
Name
(GenBank) ATP-dependent DNA ligase
Organism
rbn
Rubrivivax benzoatilyticus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
EGJ10090
LinkDB
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AA seq
575 aa
AA seq
DB search
MRQFAALYLQLDASTATGDKVAALARYFAEAPAEDAAWAVYFLAGGRPRQLVPAAVLRAT
AQQLAGLDDWLFEACYQAVGDLAETIAHVLPAPERASDGGLAEWVEQRLLPLRGLAPAEQ
AARLAEHWAALDATGRFLHVKLIGGGFRVGVSRLLVQRALAQASGLDAQRIAQRMMGYTD
ARATPSAERYRALVAPGEDAATDAGRPYPFFLAHPLQAEPPTLGPVADWLAEWKYDGIRA
QLVCRAGGCWIWSRGEELVTERFPEVVAAATGLPDGTVLDGEILAWHPGDERPAPFALLQ
QRIGRKTLTKKVLADAPVVFVAYDLLEAGGRDLRAVPQHERRARLEALLAPTPLRVSPEV
TAPDWAGLAALRAQARERGVEGLMLKQRGAAYGVGRTKADGVWWKWKIEPYAVDCVLVYA
QAGHGRRASVYTDYSFAVWNRAPRDAAEAEAAVEALVAAAGRRSAAEPDAEVEVDAGEPP
LRLVSFAKAYSGLSDAEFAAVDRVIRQTTLEKFGPVRSVRPTLVFELGFEGLAESGRHKS
GIAVRFPRMLRLRADKPLHEADTLATLRALLPPAR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagttcgccgcgctgtacctgcagctcgacgccagcaccgccaccggcgacaag
gtggcggcgctggcgcgttacttcgccgaggcgccggccgaggatgccgcctgggcggtc
tacttcctggccggcggccggccgcgccagctcgtgccggcggccgtgctgcgtgccacc
gcgcagcagctcgccggcctcgacgactggctgttcgaggcctgctaccaggccgtcggc
gatctcgccgagaccatcgcccacgtgctgccggcgcccgaacgtgcgtccgacggcggc
ctggccgaatgggtggagcagcgcctgctgccgctgcgcgggctggccccggccgagcag
gccgcgcgcctggcggaacactgggcggcgctggacgccaccggccgcttcctgcacgtc
aagctgatcggcggcggctttcgcgtcggcgtcagccggctgctggtgcagcgtgcgctg
gcccaggcctcgggcctggacgcccagcgcatcgcccagcgcatgatgggctacaccgac
gcacgcgcgacgcccagcgccgagcgctaccgggcgctggtggccccgggtgaagacgcc
gccaccgacgccggccgcccgtatccgtttttcctcgcccacccgctgcaggccgagccg
ccgacgctggggccggtcgccgactggctggccgaatggaagtacgacggcatccgcgcc
cagctggtgtgccgcgccggcggctgctggatctggtcgcgtggcgaggaactggtcaca
gagcgtttcccggaggtcgtcgcggccgcgaccggcttgcccgacggcacggtgctcgac
ggcgagatcctcgcctggcaccccggcgacgagcgcccggcgccgttcgcgctgctgcag
cagcgcatcggccgcaagacgctgacgaagaaggtgctggccgacgcgccggtggtcttc
gtcgcctacgacctgctcgaagccggcggccgggacctgcgcgccgtgccgcagcacgag
cgtcgggcgcggctcgaggcgctgctggcgccgacgccgctgcgtgtctcgcccgaggtg
acggcgcccgactgggcgggcctcgccgcgctgcgtgcgcaggcgcgtgagcgcggcgtc
gaagggctgatgctcaagcagcgcggtgcggcctacggcgtcggccgcaccaaggccgac
ggcgtctggtggaagtggaagatcgagccttacgcggtcgactgcgtgctggtctacgcc
caggccggccacggccggcgcgccagcgtctacaccgactacagcttcgcggtctggaac
cgcgcgccgcgcgacgccgccgaagccgaggccgccgtcgaggcgctggtcgccgcggcc
gggcgccgcagcgccgccgagcccgacgccgaggtcgaggtcgatgccggcgagccgccg
ctgcgcctggtgtccttcgccaaggcctactcgggcctcagcgacgccgagttcgccgcc
gtcgaccgcgtgatccggcagacgacgctggagaagttcggcccggtgcgcagcgtgcgg
ccgacgctggtcttcgagctcggcttcgagggcctggccgagagcggccgccacaagagc
ggcatcgcggtgcgtttcccgcgcatgctgaggctgcgcgccgacaagccgctgcacgag
gccgacacgctggcgacgctgcgtgcgctgctgccgccggcgcgctga
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