Ruminococcaceae bacterium CPB6: B6259_04780
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Entry
B6259_04780 CDS
T04880
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp00300
Lysine biosynthesis
rbp00550
Peptidoglycan biosynthesis
rbp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B6259_04780
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B6259_04780
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbp01011
]
B6259_04780
Enzymes [BR:
rbp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
B6259_04780
Peptidoglycan biosynthesis and degradation proteins [BR:
rbp01011
]
Precursor biosynthesis
Amino acid ligase
B6259_04780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HTH_micro
LpxD
DUF1611
Motif
Other DBs
NCBI-ProteinID:
ARP50251
UniProt:
A0A1W6WDB2
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All DBs
Position
complement(957175..958647)
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AA seq
490 aa
AA seq
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MTIKELLEDMPCKVTGPVDTPVTGIVYDSRMVKPGCVFVCLVGSKTDSHVYAAQAAEGGA
AAVVTQHDIAPVSCTEIRVEDTRKALALLSAAWFGHPAEKLKVIGVTGTKGKTTSTYMIH
SILEAAGITTGIIGTIGTVIGSQLIKTNNTTPESYDIQKFMRMMVDAGCRACVLEASSIG
LRDHRVDGFTFDIGLFTNFSEDHIGGLEHKDMAEYMACKAMLFQKCRLGVINIDDENWKG
ITAGHTCELTSYGFGSEAKLHAESPELVSQPGYLGIAFDLCGSMQGRVRIDISGKFNVYN
ALGAVAVCQQFGVALDNVRKGLDTVKVKGRVEPVEVPGGYTLLIDYAHNAVSMENILTTL
REYHPNRLICMFGAGGNRPKLRRYEMGEVSGKLADLSVITADNSRYEDVMDILADIEVGL
KKTTGKYIVVPDRKQAIKYCIDNAQKGDVVVLAGKGHEDYQEIKGVKYPFDERDVIHDIL
QEEGKLPAEY
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaaagaactgctggaagatatgccatgtaaagtgactggaccggtcgataca
ccggtaaccggcattgtttatgactcccgcatggtgaagccgggctgtgtgtttgtctgt
ctggtgggcagtaagacggacagtcacgtttatgctgcacaggcagcggagggcggcgcg
gccgccgttgtaacacagcatgatattgcaccggtttcctgcacggaaattcgtgtggaa
gatacgcgtaaggcactggcactgctttcggcagcatggttcggtcatcccgcggaaaag
ctgaaggttattggtgtcacgggcaccaaagggaaaacaacttctacctatatgattcat
tccattttggaagccgcaggcattacgaccggcattatcggaacgattggtacagtcatc
ggcagccagctgattaaaaccaataacacaacgccggaatcatacgacatacagaaattt
atgcgcatgatggtagacgctggctgccgtgcctgtgtgctggaagccagttcgataggc
ttgcgtgaccaccgtgtggacggtttcacctttgatattgggctgtttaccaactttagc
gaggaccatatcggcgggctggagcacaaggacatggcggaatatatggcctgcaaagca
atgctgttccagaaatgccgtctaggtgtcatcaatatcgatgacgaaaactggaaaggc
attaccgcaggacatacctgtgaactgacaagctatggctttggttcggaagccaagctg
catgctgaaagtccggaactggtgtcacagcccggttacctcggcattgcctttgacctg
tgcggcagtatgcaggggcgtgtacgcattgatatttccggtaaatttaacgtttataac
gcactcggtgctgtagctgtctgtcagcagttcggtgttgcattggacaacgtgcgcaaa
gggctggacactgtgaaggtaaagggacgcgtggagccggtggaagttcccggcggctac
accctgctgattgactacgcacataacgccgtcagcatggaaaacattctgacaacactg
cgggaatatcacccgaatcgccttatctgtatgtttggtgccggcggcaaccgcccgaaa
ctccgccgctacgaaatgggtgaagtcagcggtaagttggccgacctctccgtgattacc
gcggacaattcccggtatgaagatgtgatggatattctggccgatattgaagtgggcctg
aaaaagacaaccggcaagtatattgtcgttccggaccgcaaacaggctatcaagtactgc
atagacaacgcccagaaaggcgacgttgttgtcctggcgggcaagggtcacgaagattac
caggaaatcaagggagttaaatatccctttgatgaacgggatgtaattcatgatattctg
caggaggaaggaaaacttccggcagaatactaa
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