Rhizobium binae: J2J99_02300
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Entry
J2J99_02300 CDS
T07180
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rbq
Rhizobium binae
Pathway
rbq00300
Lysine biosynthesis
rbq01100
Metabolic pathways
rbq01120
Microbial metabolism in diverse environments
rbq01230
Biosynthesis of amino acids
Module
rbq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J2J99_02300 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbq01002
]
J2J99_02300 (dapE)
Enzymes [BR:
rbq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
J2J99_02300 (dapE)
Peptidases and inhibitors [BR:
rbq01002
]
Metallo peptidases
Family M20
J2J99_02300 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QSY82680
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Position
complement(470248..471441)
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AA seq
397 aa
AA seq
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MTATDPVVNLQALIRCPSVTPAEGGALTALDAMLTPLGFTVDKVIAREEGTADIENLYAR
LGSDGPHLVFAGHTDVVPVGDEAAWTHPPFAAEVSNGELFGRGAVDMKGGIACFVAAIAR
HIEKNGPPAGSISLLITGDEEGPAINGTVKLLQWATERGERWDACLVGEPTNPDRLGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPVRGIVQLTQALMDPPFDGGTDDFQPSNLEV
TTVDVGNPATNVIPAKASASFNIRFNDSWTVDTLRAEILRRLDAAAGNDQLRPGREPVKY
DIVWADRPSHVFLTRNNALIASLSSAIESVAGRSPALSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTAIYETFIDRWFAHAGS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccgaccccgtcgtcaatctccaggctttgattcgctgcccgtccgtgacg
cccgccgaaggcggcgcgctcacggcgctcgacgccatgctcacgccgctcggctttacg
gtcgacaaggtgatcgcacgcgaagagggcacagccgatatcgagaacctctatgcccgc
ctcggcagcgacggcccgcatctggtgtttgccggccacaccgatgtcgtgccggtcggc
gacgaagccgcctggacgcatccgccctttgccgccgaggtatcaaatggcgagctcttc
ggccgcggcgccgtcgacatgaagggcggcattgcctgtttcgtcgccgccatcgcccgc
catatcgagaagaacggcccgccggccggctcgatttccctgctgatcaccggcgacgaa
gaaggcccggcgatcaacggcaccgtcaagctgctgcaatgggctacggaacggggcgag
cgctgggacgcctgcctggtcggcgaacccacaaatcccgacaggctcggcgacatgatc
aagatcggccggcgcggctcgctgtcgggcaggatcacggtgcacggcgtgcagggccac
gcggcctatccgcaccttgccgacaatcccgtgcgcggcatcgtccagctgacgcaggcg
ctgatggatccgcccttcgacggcggcaccgacgatttccagccgtcgaacctcgaggtg
acgacggtcgatgtcggcaatcccgccacgaacgtgattccggcaaaggcatcggcgagc
ttcaacatccgcttcaacgacagctggaccgtcgacacgctgcgcgcggaaatcttgcgg
cggctcgatgccgccgccggcaacgaccagctgcgtccgggccgggagcccgtgaaatac
gatatcgtctgggccgaccggccgagccacgtcttcctgacgcgcaacaatgctttgatc
gcctcgctgtcttcggccatcgaaagcgtcgccggccgctcgccggcgctttcgaccacc
ggcggcacgtcggatgcccgcttcatcaaggactattgcccggtcgtcgagttcggcctc
gtcggtcagacgatgcacatggtcgacgagcgtgtcgccgttgccgatctggagacgctg
acggcgatctacgagaccttcatcgaccgctggttcgcccatgccgggtcttag
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